Keywords: paralog processing, ascorbate, CO2-fixing enzyme, tomato, root development, gene regulatory network

Latest 35 Papers

Discovery of tomato UDP-glucosyltransferases involved in bioactive jasmonate homeostasis using limited proteolysis-coupled mass spectrometry

Authors: Venegas-Molina, J., Mohnike, L., Selma Garcia, S., Janssens, H., Colembie, R., Kimpe, I., Jaramillo-Madrid, A. C., Lacchini, E., Winne, J. M., Van Damme, P., Feussner, I., Goossens, A., Sola, K.

Date: 2025-10-15 · Version: 1

DOI: 10.1101/2025.10.15.682356

Model Organism: Solanum lycopersicum

jasmonic acid limited proteolysis‑coupled mass spectrometry UDP‑glucuronosyltransferase JA catabolism tomato

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Mammalian growth-regulating factors enhance regeneration of recalcitrant transgenic tomato accessions

Authors: Garchery, C., Benejam, J., Grau, A., Gricourt, J., Pelpoir, E., Causse, M.

Date: 2025-09-29 · Version: 1

DOI: 10.1101/2025.09.25.678568

Model Organism: Solanum lycopersicum

CRISPR-Cas9 plant regeneration mammalian growth factors cytokines tomato

SlATG8f enhances tomato thermotolerance and fruit quality via autophagy and HS pathways

Authors: Cheng, q., Xu, w., wen, c., He, Z., Song, L.

Date: 2025-09-25 · Version: 1

DOI: 10.1101/2025.09.23.678159

Model Organism: Solanum lycopersicum

SlATG8f autophagy high-temperature stress tomato fruit quality

Repressed expression of nucleoporins and importins impairs plant defense against an infectious noncoding RNA

Authors: Wang, Y., Fang, Y., Merritt, B. A., Liu, B., Gu, Y., Mou, Z., Wang, Y., Hao, J.

Date: 2025-09-21 · Version: 1

DOI: 10.1101/2025.09.19.677415

Model Organism: Solanum lycopersicum

viroid nucleoporins NPR1 salicylic acid analog tomato

Conserved transcriptional reprogramming in nematode infected root cells

Authors: Saura-Sanchez, M., Gomez Rojas, A., Deveux, M., Minne, M., Grones, C., Eekhout, T., Abril-Urias, P., Van Bel, M., Tenorio Berrio, R., Vandepoele, K., Escobar, C., Beeckman, T., De Rybel, B., Kyndt, T.

Date: 2025-09-05 · Version: 1

DOI: 10.1101/2025.09.05.674408

Model Organism: Arabidopsis thaliana; Oryza sativa

plant‑parasitic nematodes single‑cell transcriptomics gene regulatory network conserved regulator AtATHB2/OsHOX28 nematode resistance

Comparative gene regulatory network mapping of Brassicaceae members with differential drought tolerance

Authors: Pandiarajan, R., Lin, C.-W., Sauer, M., Rothballer, S. T., Marin-de la Rosa, N., Schwehn, P., Papadopoulou, E., Mairhormann, B., Falter-Braun, P.

Date: 2025-08-25 · Version: 1

DOI: 10.1101/2025.08.24.668636

Model Organism: Multi-species

drought tolerance gene regulatory network Brassicaceae transcription factor interactions ABA signaling

Pseudomonas aeruginosa SPT08, a tomato endophyte, improves plant growth and controls bacterial wilt in tomato

Authors: Giri, S. J., Rana, R., Sharma, P. L., Begum, S., Dutta, L., Kalita, S., Bhuyan, S., Jain, M., Agarwala, N., Patil, P. B., Ray, S. K.

Date: 2025-08-20 · Version: 1

DOI: 10.1101/2025.08.17.670768

Model Organism: Solanum lycopersicum

Pseudomonas aeruginosa tomato bacterial wilt endophyte plant growth promotion

HHO5: A key orchestrator of dose-dependent nitrogen signaling pathways in Arabidopsis

Authors: Hinckley, W. E., Swift, J., Romei, F., Muschietti, J., Huang, S. S. C., Coruzzi, G. M., Obertello, M.

Date: 2025-08-02 · Version: 1

DOI: 10.1101/2025.07.31.667803

Model Organism: General

HHO5 transcription factor nitrogen-dose signaling phloem-specific expression dual activator/repressor gene regulatory network

Introducing furanocoumarin biosynthetic genes in tomato results in coumarins accumulation and impacted growth

Authors: Bouille, A., Villard, C., Galati, G., Roumani, M., Fauvet, A., Grosjean, J., Hoengenaert, L., Boerjan, W., Ralph, J., Hilliou, F., Robin, C., Hehn, A., Larbat, R.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.07.663522

Model Organism: Solanum lycopersicum

metabolic engineering linear furanocoumarin pathway coumarins tomato metabolomics

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