Keywords: paralog processing, ascorbate, codon usage, transcriptomics, autophagy, plant immunity

Latest 71 Papers

NUDIX Hydrolases Target Specific Inositol Pyrophosphates and Regulate Phosphate Homeostasis and Bacterial Pathogen Susceptibility in Arabidopsis

Authors: Schneider, R., Lami, K., Prucker, I., Stolze, S. C., Strauss, A., Schmidt, J. M., Bartsch, S. M., Langenbach, K., Lange, E., Ritter, K., Furkert, D., Faiss, N., Kumar, S., Hasan, M. S., Makris, A., Krusenbaum, L., Wege, S., Belay, Y. Z., Kriescher, S., The, J., Harings, M., Grundler, F., Ried-Lasi, M. K., Schoof, H., Gaugler, P., Kamleitner, M., Fiedler, D., Nakagami, H., Giehl, R. F., Lahaye, T., Bhattacharjee, S., Jessen, H. J., Gaugler, V., Schaaf, G.

Date: 2025-08-12 · Version: 2

DOI: 10.1101/2024.10.18.619122

Model Organism: Arabidopsis thaliana

Inositol pyrophosphates NUDIX hydrolases phosphate homeostasis iron homeostasis plant immunity

A dual component system instructs membrane hydrolysis during the final stages of plant autophagy

Authors: Castets, J., Buridan, M., Toboso Moreno, I., Sanchez de Medina Hernandez, V., Gomez, R. E., Dittrich-Domergue, F., Lupette, J., Chambaud, C., Pascal, S., Ibrahim, T., Bozkurt, T. O., Dagdas, Y., Domergue, F., Joubes, J., Minina, A. E. A., Bernard, A.

Date: 2025-08-02 · Version: 1

DOI: 10.1101/2025.08.01.668046

Model Organism: Arabidopsis thaliana

autophagy phospholipase Arabidopsis thaliana vacuolar lumen LCAT3/LCAT4

Cell-type specific gating of gene regulatory modules as a hallmark of early immune responses in Arabidopsis leaves

Authors: Wang, S., Bezrukov, I., Wu, P.-J., Gauss, H., Timmermans, M., Weigel, D.

Date: 2025-08-01 · Version: 1

DOI: 10.1101/2025.08.01.668105

Model Organism: Arabidopsis thaliana

single-cell RNA sequencing Arabidopsis thaliana plant immunity PTI and ETI WRKY transcription factors

A sublethal drought and rewatering time course reveals intricate patterning of responses in the annual Arabidopsis thaliana

Authors: Fitzek-Campbell, E., Psaroudakis, D., Weisshaar, B., Junker, A., Braeutigam, A.

Date: 2025-07-27 · Version: 1

DOI: 10.1101/2025.07.25.666782

Model Organism: Arabidopsis thaliana

drought stress Arabidopsis thaliana transcriptomics high‑throughput phenotyping biomarker transcripts

Transcriptomics uncovers molecular mechanisms underlying salt-inhibited root growth in Festuca rubra

Authors: Lan, B., Ru, D., Du, F. K., Yin, K.

Date: 2025-07-26 · Version: 1

DOI: 10.1101/2025.07.22.665687

Model Organism: Festuca rubra

salt stress root growth inhibition Festuca rubra transcriptomics hormone signaling

The transcriptional mechanism behind Mimosa pudica leaf-folding in response to mechanical disturbance

Authors: Buti, M., Checcucci, A., Vergata, C., Renna, L., Pollastri, S., Loreto, F., Mancuso, S., Martinelli, F.

Date: 2025-07-21 · Version: 1

DOI: 10.1101/2025.07.17.665295

Model Organism: Mimosa pudica

Mimosa pudica mechanical stress chlorophyll fluorescence transcriptomics stress‑responsive gene expression

A conserved small RNA-generating gene cluster undergoes sequence diversification and contributes to plant immunity

Authors: Feng, L., Hou, Y., Toghani, A., Wang, Z., Tang, B., Atkinson, N., Li, H., Qiao, Y., Wang, Y., Hua, J., Zhai, J., Ma, W.

Date: 2025-07-21 · Version: 1

DOI: 10.1101/2025.07.20.665670

Model Organism: Arabidopsis thaliana

secondary siRNA pentatricopete repeat proteins plant immunity gene duplication co‑evolutionary arms race

Enhancement of Arabidopsis growth by Enterobacter sp. SA187 under elevated CO2 is dependent on ethylene signalling activation and primary metabolism reprogramming

Authors: Ilyas, A., Mauve, C., Pateyron, S., Paysant-Le Roux, C., Bigeard, J., Hodges, M., de Zelicourt, A.

Date: 2025-07-09 · Version: 1

DOI: 10.1101/2025.07.08.663752

Model Organism: Arabidopsis thaliana

Enterobacter sp. SA187 elevated CO2 Arabidopsis thaliana phytohormone signaling transcriptomics

Integrative Multi-Omics Analysis Reveals Stress-Specific Molecular Architectures in Soybean under Drought and Rust Infection

Authors: Husein, G., Castro-Moretti, F. R., Prado, M., Amorim, L., Mazzafera, P., Canales, J., Monteiro-Vitorello, C. B.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.07.663534

Model Organism: Glycine max

Asian soybean rust drought stress transcriptomics metabolomics co-expression network

ATG8i Autophagy activation is mediated by cytosolic Ca2+ under osmotic stress in Arabidopsis thaliana

Authors: Castillo-Olamendi, L., Gutierrez-Martinez, J., Jimenez-Nopala, G., Galindo, A., Barrera-Ortiz, S., Rosas-Santiago, P., Cordoba, E., Leon, P., Porta, H.

Date: 2025-07-02 · Version: 1

DOI: 10.1101/2025.07.02.662772

Model Organism: General

autophagy osmotic stress Ca²⁺ signaling ATG8i ER‑phagy

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