Keywords: paralog processing, ascorbate, root development, plasmodesmata, gene regulatory network

Latest 23 Papers

Network analysis of flowering time genes suggests regulatory changes among SOC1 orthologues in response to cold in Brassica napus

Authors: Sidhu, G. S., Burrows, S., Woolfenden, H., Wells, R., Morris, R. J.

Date: 2026-01-20 · Version: 2

DOI: 10.64898/2025.12.16.694548

flowering time gene regulatory network comparative transcriptomics Brassica napus subfunctionalisation

CRK2 controls the spatiotemporal distribution of QSK1 at plasma membrane during osmotic stress

Authors: Jindal, S., Zeiner, A., Bondar, A., Neubergerova, M., Stolze, S. C., Harzen, A., Colina, F. J., Liekens, S., Pääkkönen, M., Merilahti, J., Kulich, I., Pleskot, R., Nakagami, H., Wrzaczek, M.

Date: 2026-01-14 · Version: 2

DOI: 10.64898/2025.12.09.692923

Model Organism: Arabidopsis thaliana

plasmodesmata callose deposition receptor-like kinases osmotic stress protein phosphorylation

Root-Suppressed Phenotype of Tomato Rs Mutant is Seemingly Related to Expression of Root-Meristem-Specific Sulfotransferases

Authors: Kumari, A., Gupta, P., Santisree, P., Pamei, I., Valluri,, S., Sharma, K., Venkateswara Rao, K., Shukla, S., Nama, S., Sreelakshmi, Y., Sharma, R.

Date: 2026-01-03 · Version: 1

DOI: 10.64898/2026.01.03.697460

Model Organism: Solanum lycopersicum

root development sulfur metabolism sulfotransferase radiation‑induced mutant tomato

An ancient alkalinization factor informs Arabidopsis root development

Authors: Xhelilaj, K., von Arx, M., Biermann, D., Parvanov, A., Faiss, N., Monte, I., Klingelhuber, F., Zipfel, C., Timmermans, M., Oecking, C., Gronnier, J.

Date: 2025-12-23 · Version: 1

DOI: 10.64898/2025.12.22.695669

Model Organism: Arabidopsis thaliana

REMORIN proteins H⁺‑ATPase inhibition extracellular pH (pHe) alkalinization root development Arabidopsis thaliana

CYSTEINE-RICH RLK2 regulates development via callose synthase-dependent symplastic transport in Arabidopsis

Authors: Zeiner, A., Krasensky-Wrzaczek, J., Jindal, S., Hajny, J., Sharma, M., Morina, F., Andresen, E., Pääkkönen, M., Küpper, H., Merilahti, J., Wrzaczek, M.

Date: 2025-12-05 · Version: 1

DOI: 10.64898/2025.12.03.691776

Model Organism: Arabidopsis thaliana

CRK2 CALS1 CALS3 plasmodesmata phloem loading

Consistent drought regulation in grapevine is driven by directional transcription factor activity

Authors: Vasquez-Marambio, G., Moyano, T., Navarro, D., Sequeida, A., Gainza-Cortes, F., Matus, J. T., Orellana, A., Alvarez, J. M.

Date: 2025-11-16 · Version: 1

DOI: 10.1101/2025.11.14.688560

Model Organism: Vitis vinifera

drought tolerance Vitis vinifera gene regulatory network transcription factors meta‑transcriptomics

Plasmodesmal closure elicits stress responses

Authors: Tee, E., Breakspear, A., Papp, D., Thomas, H. R., Walker, C., Bellandi, A., Faulkner, C.

Date: 2025-10-17 · Version: 3

DOI: 10.1101/2024.05.08.593115

Model Organism: Arabidopsis thaliana

plasmodesmata callose deposition salicylic acid immune response transgenic closure

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Conserved transcriptional reprogramming in nematode infected root cells

Authors: Saura-Sanchez, M., Gomez Rojas, A., Deveux, M., Minne, M., Grones, C., Eekhout, T., Abril-Urias, P., Van Bel, M., Tenorio Berrio, R., Vandepoele, K., Escobar, C., Beeckman, T., De Rybel, B., Kyndt, T.

Date: 2025-09-05 · Version: 1

DOI: 10.1101/2025.09.05.674408

Model Organism: Arabidopsis thaliana; Oryza sativa

plant‑parasitic nematodes single‑cell transcriptomics gene regulatory network conserved regulator AtATHB2/OsHOX28 nematode resistance

Comparative gene regulatory network mapping of Brassicaceae members with differential drought tolerance

Authors: Pandiarajan, R., Lin, C.-W., Sauer, M., Rothballer, S. T., Marin-de la Rosa, N., Schwehn, P., Papadopoulou, E., Mairhormann, B., Falter-Braun, P.

Date: 2025-08-25 · Version: 1

DOI: 10.1101/2025.08.24.668636

Model Organism: Multi-species

drought tolerance gene regulatory network Brassicaceae transcription factor interactions ABA signaling

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