Keywords: paralog processing, ascorbate, root development, spatial transcriptomics, autophagy

Latest 30 Papers

Imputation integrates single-cell and spatial gene expression data to resolve transcriptional networks in barley shoot meristem development

Authors: Demesa-Arevalo, E., Dorpholz, H., Vardanega, I., Maika, J. E., Pineda-Valentino, I., Eggels, S., Lautwein, T., Kohrer, K., Schnurbusch, T., von Korff, M., Usadel, B., Simon, R.

Date: 2025-05-11 · Version: 1

DOI: 10.1101/2025.05.09.653223

Model Organism: Hordeum vulgare

Barley (Hordeum vulgare)inflorescence meristems single-cell RNA sequencing spatial transcriptomics developmental gene regulation

The autophagy-related genes AtATG5 and AtATG7 influence reserve mobilisation and responses to ABA during seed germination in Arabidopsis thaliana

Authors: Contreras, E., Sanchez-Vicente, I., Pastor-Mora, E., Aylon-Rodriguez, M., Gonzalez-Ceballos, M., Delgado-Gutierrez, M. A., Lorenzo, O., Vicente-Carbajosa, J., Iglesias-Fernandez, R.

Date: 2025-04-21 · Version: 2

DOI: 10.1101/2024.05.15.593177

Model Organism: Arabidopsis thaliana

autophagy Arabidopsis thaliana ABA signaling ATG5/ATG7 ABI5

Chemical Inhibition of Splicing-Related Protein Kinases Reveals Phosphorylation-Driven Regulation of RNA Alternative Splicing in Arabidopsis Seedlings

Authors: Rodriguez Gallo, M. C., Murray, C., Kennedy, C., Talasila, M., Bhatt, D., Steyer, J., Glover, M., Uhrig, R. G.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.24.644839

Model Organism: Arabidopsis thaliana

SR protein kinases alternative splicing root development chemical inhibition phosphoproteomics

Root hair lifespan is antagonistically controlled by autophagy and programmed cell death

Authors: Feng, Q., Zhu, S., Wang, X., Liu, Y., Zhao, J., Dagdas, Y., Nowack, M. K.

Date: 2025-03-19 · Version: 1

DOI: 10.1101/2025.03.18.643910

Model Organism: Arabidopsis thaliana

root hair longevity autophagy ATG2 ATG5 ATG7 NAC transcription factors programmed cell death

Cell-type specific autophagy in root hair forming cells is essential for salt stress tolerance in Arabidopsis thaliana

Authors: Zhao, J., Loefke, C., Yeung, K. C., Chen, Y., Dagdas, Y.

Date: 2025-03-18 · Version: 1

DOI: 10.1101/2025.03.18.643786

Model Organism: Arabidopsis thaliana

autophagy trichoblast Arabidopsis thaliana salt stress cell-type-specific regulation

Bacteria use processing body condensates to attenuate host translation during infection

Authors: Gonzalez-Fuente, M., Schulz, N., Abdrakhmanov, A., Izzati, G., Zhu, S., Langin, G., Gouguet, P., Franz-Wachtel, M., Macek, B., Hafren, A., Dagdas, Y., Üstün, S.

Date: 2025-03-11 · Version: 2

DOI: 10.1101/2025.01.09.632196

Model Organism: General

Pseudomonas syringae processing bodies translation attenuation ER stress response autophagy

MYB93 regulates responses to environmental sulphur in Arabidopsis and tomato.

Authors: Cao, X., Wilkinson, H. B., Hutton, B., McMulkin, N., Graham, N. S., Etherington, R., Oliver, A. G., Clayton, C. M., Kaur, H., Coates, J. C.

Date: 2025-03-07 · Version: 1

DOI: 10.1101/2025.03.04.641362

Model Organism: Arabidopsis thaliana

sulfur nutrition AtMYB93 root development transcriptome analysis elemental analysis

The ribosomal protein RPS6A modulates auxin signalling and root development in Arabidopsis

Authors: Pan, K., Hou, K., Kong, M., Tan, S.

Date: 2025-02-28 · Version: 1

DOI: 10.1101/2025.02.26.640312

Model Organism: Arabidopsis thaliana

RPS6A auxin signaling Arabidopsis thaliana root development PIN transporters

Melatonin-mediated methylglyoxal homeostasis and regulation of autophagy during seed germination under PEG-induced drought stress in upland cotton

Authors: Dake, D., Laha, S., Kumar, A., Gudipalli, P.

Date: 2025-02-23 · Version: 1

DOI: 10.1101/2025.02.18.638685

Model Organism: Gossypium hirsutum

melatonin priming methylglyoxal detoxification drought stress autophagy glyoxalase system

Lack of AtMC1 catalytic activity triggers autoimmunity dependent on NLR stability

Authors: Salguero-Linares, J., Armengot, L., Ayet, J., Ruiz-Solani, N., Saile, S., Salas-Gomez, M., Fernandez, E., Denolf, L., Navarrete, F., Krumbach, J., Kaiser, M., Stael, S., Van Breusegem, F., Gevaert, K., Kaschani, F., petersen, m., El Kasmi, F., Valls, M., Coll, N. S.

Date: 2025-02-03 · Version: 1

DOI: 10.1101/2025.01.31.635913

Model Organism: Arabidopsis thaliana

metacaspase 1 autoimmunity NLR homeostasis SNIPER1 autophagy

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