Keywords: paralog processing, ascorbate, spatial transcriptomics, GWAS, transcriptomics, proteomics

Latest 76 Papers

High throughput screen of NPQ in sorghum shows highly polygenic architecture of photoprotection

Authors: Vath, R. L., Fernandes, S., Monier, B., Glowacka, K., Walter, J., Lipka, A. E., Ferguson, J. N., Bernacchi, C., Pederson, T., Kromdijk, J.

Date: 2025-04-22 · Version: 1

DOI: 10.1101/2025.04.18.649521

Model Organism: Sorghum bicolor

photoprotection non-photochemical quenching Sorghum bicolor GWAS TWAS

ERF transcription factor regulons underpin growth-defence trade-off under acute heat stress in rice seedlings

Authors: Nair, A. U., Vishwakarma, S., Guha, T., Kadumuri, R. V., Fritschi, F. B., Chavali, S., Allu, A. D.

Date: 2025-04-22 · Version: 1

DOI: 10.1101/2025.04.21.649784

Model Organism: Oryza sativa

heat stress Oryza sativa seedling transcriptomics ethylene responsive factors phytohormone treatment

Balancing nutrient remobilization and photosynthesis: the dual role of lupin cotyledons after germination

Authors: Angermann, C., Heinemann, B., Bueno Nogueira, B., Mai, H.-J., Bauer, P., Hildebrandt, T. M.

Date: 2025-04-18 · Version: 1

DOI: 10.1101/2025.04.15.648908

Model Organism: Lupinus albus

nutrient remobilization cotyledon function white lupin proteomics nitrogen deficiency

A transcriptional dissection of the petty spurge (Euphorbia peplus L.) reproductive structure

Authors: Johnson, A. R., Bao, A., Frank, M. H.

Date: 2025-04-17 · Version: 2

DOI: 10.1101/2024.05.06.592779

Model Organism: Euphorbia peplus

cyathium transcriptomics floral development genes SEP1 paralogs Euphorbia peplus

Ethylene and ROS Signaling Are Key Regulators of Lateral Root Development under Salt Stress in Tomato

Authors: Rahmati Ishka, M., Zhao, J., Sussman, H., Mohanty, D., Craft, E., Yu, L., Pineros, M., Tester, M., Kawa, D., Mittler, R., Nelson, A., Fei, Z., Julkowska, M. M.

Date: 2025-04-15 · Version: 2

DOI: 10.1101/2024.06.20.599848

Model Organism: Solanum lycopersicum

root system architecture salt stress GWAS bulk segregant analysis RNA-Seq

Identification of MARVELlous Protein Markers for Phytophthora infestans Extracellular Vesicles

Authors: Breen, S., McLellan, H., Wang, W., Wang, S., Welsh, L., Pham, J., Whisson (SW), s., Boevink, P., Birch, P. R.

Date: 2025-04-14 · Version: 1

DOI: 10.1101/2025.04.11.648357

Model Organism: Phytophthora infestans

extracellular vesicles Phytophthora infestans RxLR effectors MARVEL domain proteins proteomics

Welcome pathogens: transient heat dampens the responses to acibenzolar-S-methyl beyond defenses in apple plants

Authors: Chavonet, E., Nguyen, B.-h., Heintz, C., Cournol, R., Siroka, J., Novak, O., Larbat, R., Gaucher, M., Brisset, M.-N., Pantin, F., Degrave, A.

Date: 2025-04-06 · Version: 1

DOI: 10.1101/2025.04.03.647103

Model Organism: Malus domestica

heat stress acibenzolar‑S‑methyl (ASM)induced immunity apple (Malus domestica)transcriptomics

Omics-driven Identification of Candidate Genes and SNP markers in a Major QTL Controlling Early Heading in Rice

Authors: Rao, D., T, N. S., CG, G., Gaur, N., Jamaloddin, M., Maganti, S. M., Raman, M. S., Patel, H. K., Tiwari, S., Sonti, R. V.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.25.645207

Model Organism: Oryza sativa

heading date rice (Oryza sativa)QTL-seq SNP markers transcriptomics

Multilevel analysis of response to plant growth promoting and pathogenic bacteria in Arabidopsis roots and the role of CYP71A27 in this response

Authors: Koprivova, A., Ristova, D., Berka, M., Berkova, V., Türksoy, G. M., Andersen, T. G., Westhoff, P., Cerny, M., Kopriva, S.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.26.645393

Model Organism: Arabidopsis thaliana

CYP71A27 plant‑microbe interaction Pseudomonas fluorescens CH267 Burkholderia glumeae PG1 transcriptomics

Whats left from the brew? Investigating residual barley proteins in spent grains for downstream valorization opportunities

Authors: Gregersen Echers, S., Mikkelsen, R. K., Abdul-Khalek, N., Queiroz, L. S., Hobley, T. J., Schulz, B. L., Overgaard, M. T., Jacobsen, C., Yesiltas, B.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.26.645420

Model Organism: Barley (Hordeum vulgare)

Brewer's spent grain proteomics B3-Hordein allergenic proteins protein hydrolysis

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