Keywords: paralog processing, ascorbate, spatial transcriptomics, transcriptome, Zea mays

Latest 36 Papers

Partial retention of ancient function increases genetic pleiotropy in grass evolution

Authors: de Neve, A. E., Kelly, O. A., Kelly, T., Leiboff, S., Bartlett, M. E.

Date: 2025-08-23 · Version: 1

DOI: 10.1101/2025.08.22.670905

Model Organism: Zea mays

genetic pleiotropy axillary meristem suppression floral organ suppression high-throughput quantitative phenotyping Zea mays

Spatial transcriptomics identifies distinct domains regulating yield-related traits of the wheat ear

Authors: Qu, Y., Tan, C., Yang, L., Pasquariello, M., Alabdullah, A. K., Sun, S., Iqbal, M., Salamon, J., Boden, S.

Date: 2025-08-13 · Version: 1

DOI: 10.1101/2025.08.12.670006

Model Organism: Triticum aestivum

spikelet development spatial transcriptomics wheat inflorescence RAMOSA2 ALOG1

Non-catalytic and catalytic TREHALOSE-6-PHOSPHATE SYNTHASES interact with RAMOSA3 to control maize development.

Authors: Tran, T., Claeys, H., Abraham Juarez, M. J., Vi, L. S., Xu, X., Michalski, K., Chou, T. H., Iohannes, S. D., Boumpas, P., Williams, Z., Sheppard, S., Griffiths, C., Paul, M., Furukawa, H., Jackson, D.

Date: 2025-08-12 · Version: 1

DOI: 10.1101/2025.08.09.669499

Model Organism: Zea mays

Trehalose-6-phosphate non‑catalytic TPS Zea mays protein complex developmental regulation

ZmCRY1s interact with GL2 in a blue light dependent manner to regulate epidermal wax composition in Zea mays

Authors: Zhao, Z., Feng, F., Liu, Y., Liu, Y., Wang, F., Ni, Y., Liang, H., Hu, W., Wang, S., Hao, Y., Li, X., Li, J., Wang, J., Zhang, P., Liu, H.

Date: 2025-08-06 · Version: 1

DOI: 10.1101/2025.08.06.668858

Model Organism: Zea mays

cryptochrome Zea mays blue light signaling UV-B tolerance epidermal wax biosynthesis

Plant-Compatible Xenium In Situ Sequencing: Optimised Protocol for Spatial Transcriptomics in Medicago truncatula Roots and Nodules

Authors: Jhu, M.-Y., Heffer, J., Deamer, A., Moraes, T. A., Piskorz, A. M., Xia, C.

Date: 2025-07-25 · Version: 1

DOI: 10.1101/2025.07.22.663073

Model Organism: Medicago truncatula

spatial transcriptomics Xenium in situ sequencing Medicago truncatula root nodules autofluorescence mitigation

Tomato leaf transcriptomic changes promoted by long-term water scarcity stress can be largely prevented by a fungal-based biostimulant

Authors: Lopez-Serrano, L., Ferez-Gomez, A., Romero-Aranda, R., Jaime Fernandez, E., Leal Lopez, J., Fernandez Baroja, E., Almagro, G., Dolezal, K., Novak, O., Diaz, L., Bautista, R., Leon Morcillo, R. J., Pozueta Romero, J.

Date: 2025-06-28 · Version: 1

DOI: 10.1101/2025.06.26.661737

Model Organism: Solanum lycopersicum

water deficit Trichoderma harzianum culture filtrate tomato drought tolerance transcriptome

Rapid replacement of established by exotic genetic lineages of the fungal maize pathogen <it>Exserohilum turcicum</it> in the Swiss Rhine valley

Authors: Vidal Villarejo, M., Hammerschmidt, M., Oppliger, B., Oppliger, H., Schmid, K. J.

Date: 2025-06-24 · Version: 1

DOI: 10.1101/2025.06.24.661258

Model Organism: Zea mays

Exserohilum turcicum metagenomic pool sequencing clonal lineages phyllobiome Zea mays

Gene regulatory network analysis of somatic embryogenesis identifies morphogenic genes that increase maize transformation frequency

Authors: Renema, J., Luckicheva, S., Verwaerde, I., Aesaert, S., Coussens, G., De Block, J., Grones, C., Eekhout, T., De Rybel, B., Brew-Appiah, R. A. T., Bagley, C. A., Hoengenaert, L., Vandepoele, K., Pauwels, L.

Date: 2025-06-23 · Version: 1

DOI: 10.1101/2025.06.22.659756

Model Organism: Zea mays

somatic embryogenesis transcription factors Zea mays single-cell transcriptomics gene regulatory network

Dynamic changes to the plastoglobule lipidome and proteome in heat-stressed maize

Authors: Devadasu, E., Susanto, F. A., Schilmiller, A. L., Johnny, C., Lundquist, P. K.

Date: 2025-06-19 · Version: 1

DOI: 10.1101/2025.06.13.659543

Model Organism: Zea mays

heat stress plastoglobules lipid composition Zea mays proteomics

Quantitative and sensitive sequencing of somatic mutations induced by a maize transposon

Authors: Scherer, J., Hinczewski, M., Nelms, B.

Date: 2025-06-10 · Version: 2

DOI: 10.1101/2025.01.22.634239

Model Organism: Zea mays

de novo mutations Mu transposon allele frequency distribution tissue-specific mutation Zea mays

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