Keywords: paralog processing, ascorbate, transcriptome, CO2-fixing enzyme, yield, Arabidopsis thaliana

Latest 249 Papers

Agent-Based Simulation of Cortical Microtubule Band Movement in the Arabidopsis Zygote

Authors: Nonoyama, T., Kang, Z., Matsumoto, H., Nakagawa, S., Ueda, M., Tsugawa, S.

Date: 2025-04-04 · Version: 4

DOI: 10.1101/2024.10.17.618799

Model Organism: Arabidopsis thaliana

circumferential cortical microtubule directional cue agent‑based simulation self‑organization Arabidopsis thaliana

Repeated acoustic stimuli induce decentralized transcriptional memory for robust priming of plant defense.

Authors: Hadj-Amor, K., Leger, O., Raffaele, S., Kovacic, M., Duclos, A., Carvalho-Silva, P., Garcia, F., Barbacci, A.

Date: 2025-04-02 · Version: 2

DOI: 10.1101/2024.05.03.592392

Model Organism: Arabidopsis thaliana

transcriptional memory defense priming acoustic stimulation Arabidopsis thaliana Sclerotinia sclerotiorum

With or without a Ca2+ signal;A proteomics approach towards Ca2+ dependent and independent proteome changes in response to oxidative stress in A. thaliana

Authors: van Dieren, A. v., Bittner, A., Wurzinger, B., Afjehi-Sadat, L., Weckwerth, W., Teige, M., Vothknecht, U. C.

Date: 2025-04-01 · Version: 1

DOI: 10.1101/2025.03.31.645912

Model Organism: Arabidopsis thaliana

Calcium signaling Reactive oxygen species Label-free quantitative proteomics Arabidopsis thaliana Oxidative stress

HISTONE DEACETYLASE COMPLEX 1 modulates sepal length through the ethylene-ROS module

Authors: Xiang, D., Qiu, D., Zhang, R., He, X., Xu, S., Zhou, M., Hong, L.

Date: 2025-03-31 · Version: 1

DOI: 10.1101/2025.03.27.645679

Model Organism: Arabidopsis thaliana

HISTONE DEACETYLASE COMPLEX 1 sepal size regulation ethylene signaling reactive oxygen species Arabidopsis thaliana

Foliar ascorbate degradation in the dark occurs independently of ascorbate peroxidase/oxidase, recycling enzymes, and senescence signaling

Authors: Hamada, T., Yamamoto, K., Hamada, A., Maruta, T.

Date: 2025-03-31 · Version: 1

DOI: 10.1101/2025.03.30.646231

Model Organism: Arabidopsis thaliana

ascorbate degradation dark-induced oxidation Arabidopsis thaliana redox regulation mutant analysis

Plant-specific adaptations of the CDC48 unfoldase

Authors: Huntington, B., Sandholu, A., Wang, J., Zhang, J., Zhao, L., Qureshi, B. M., Shahul Hameed, U. F., Arold, S. T.

Date: 2025-03-31 · Version: 1

DOI: 10.1101/2025.03.28.645892

Model Organism: Arabidopsis thaliana

CDC48A Arabidopsis thaliana protein degradation UFD1 NPL4

Misregulation of the jasmonate signaling pathway leads to altered plant microbiota interaction and plant stress responses

Authors: Lu, T.-T., Isip, M., Shih, H.-J. S., Perin, S., Ma, K.-W.

Date: 2025-03-31 · Version: 1

DOI: 10.1101/2025.03.29.646076

Model Organism: Arabidopsis thaliana

Arabidopsis thaliana plant microbiota jasmonate signaling dysbiosis synthetic bacterial community

Revisiting the Central Dogma: the distinct roles of genome, methylation, transcription, and translation on protein expression in Arabidopsis thaliana

Authors: Zhong, Z., Bailey, M., Kim, Y.-I., Pesaran-Afsharyan, N., Parker, B., Arathoon, L., Li, X., Rundle, C. A., Behrens, A., Nedialkova, D. D., Slavov, G., Hassani-Pak, K., Lilley, K. S., Theodoulou, F. L., Mott, R.

Date: 2025-03-31 · Version: 2

DOI: 10.1101/2025.01.08.631880

Model Organism: Arabidopsis thaliana

Arabidopsis thaliana codon usage gene expression DNA methylation ribosome profiling

TOC1 phosphorylation disproportionally enhances chromatin binding at rhythmic gene promoters

Authors: Yan, J., Zhang, Y., Chen, G., Gui, C., Tu, Z., Cao, D., Li, X., Somers, D. E.

Date: 2025-03-27 · Version: 2

DOI: 10.1101/2025.01.09.632189

Model Organism: Arabidopsis thaliana

TOC1 phosphorylation circadian clock Arabidopsis thaliana CCA1 repression chromatin occupancy

Next-Generation Mapping of the ACINUS-Mediated Alternative Splicing Machinery and Its Regulation by O-glycosylation in Arabidopsis

Authors: Shrestha, R., Reyes, A. V., Carey, S., Karunadasa, S. S., Zhai, W., Byun, D., Lin, W.-D., Li, J., Alerte, K., Cui, H., Wang, Z.-Y., Xu, S.-L.

Date: 2025-03-26 · Version: 2

DOI: 10.1101/2025.01.04.631329

Model Organism: Arabidopsis thaliana

alternative splicing TurboID proximity labeling O-glycosylation Arabidopsis thaliana splicing factor ACINUS

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