Keywords: paralog processing, ascorbate, transcriptome, leaf development, Fusarium graminearum

Latest 11 Papers

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Bacillus velezensis EU07 suppresses Fusarium graminearum via transcriptomic reprogramming

Authors: Baysal, O., Jimenez-quiros, C., Cevher-Keskin, B., Tor, M.

Date: 2025-10-10 · Version: 1

DOI: 10.1101/2025.10.10.681611

Model Organism: Fusarium graminearum

Bacillus velezensis Fusarium graminearum biocontrol RNA‑seq differentially expressed genes

Cross-kingdom degradomics identifies natural plant small RNAs with disease protecting activity

Authors: Werner, B. T., Nasfi, S., Procida, T., Schmidt, R., Wilhelm, J., Schaefer, P.

Date: 2025-10-06 · Version: 1

DOI: 10.1101/2025.10.06.680647

Model Organism: Brachypodium distachyon

cross‑kingdom RNAi small regulatory RNAs Brachypodium distachyon Fusarium graminearum deep sequencing

Integrative comparative transcriptomics using cultivated and wild rice reveals key regulators of developmental and photosynthetic progression along the rice leaf developmental gradient

Authors: Jathar, V., Vivek, A., Panda, M. K., Daware, A. V., Dwivedi, A., Rani, R., Kumar, S., Ranjan, A.

Date: 2025-08-09 · Version: 1

DOI: 10.1101/2025.08.07.669153

Model Organism: Oryza sativa

leaf development gene regulatory networks photosynthesis rice (Oryza)transcription factors

Mycotoxin-driven proteome remodeling reveals limited activation of Triticum aestivum responses to emerging chemotypes integrated with fungal modulation of ergosterols

Authors: Ramezanpour, S., Alijanimamaghani, N., McAlister, J. A., Hooker, D., Geddes-McAlister, J.

Date: 2025-07-01 · Version: 1

DOI: 10.1101/2025.06.30.662327

Model Organism: Triticum aestivum

Fusarium head blight 15ADON/3ANX chemotype proteomics Triticum aestivum Fusarium graminearum

Tomato leaf transcriptomic changes promoted by long-term water scarcity stress can be largely prevented by a fungal-based biostimulant

Authors: Lopez-Serrano, L., Ferez-Gomez, A., Romero-Aranda, R., Jaime Fernandez, E., Leal Lopez, J., Fernandez Baroja, E., Almagro, G., Dolezal, K., Novak, O., Diaz, L., Bautista, R., Leon Morcillo, R. J., Pozueta Romero, J.

Date: 2025-06-28 · Version: 1

DOI: 10.1101/2025.06.26.661737

Model Organism: Solanum lycopersicum

water deficit Trichoderma harzianum culture filtrate tomato drought tolerance transcriptome

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

Functional analysis of FW2.2-LIKE proteins in tomato: SlFWL5 regulates leaf size and morphology.

Authors: Beauchet, A., Ehrard, L., Boutaleb, L., Rofidal, V., Gonzalez, N., Chevalier, C., Bollier, N.

Date: 2025-02-28 · Version: 1

DOI: 10.1101/2025.02.27.640525

Model Organism: Solanum lycopersicum

CNR/FWL gene family plasmodesmata cell-to-cell communication leaf development tomato

Stress drives plasticity in leaf maturation transcriptional dynamics

Authors: Swift, J., Wu, X., Xu, J., Jain, T., Illouz-Eliaz, N., Nery, J. R., Chory, J., Ecker, J. R.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.24.639183

Model Organism: Arabidopsis thaliana

leaf development drought stress single-nucleus transcriptomics Arabidopsis thaliana cell-type specific gene upregulation

Sorting F. graminearum core effector candidates shows multiple fungal proteins that target the wheat cell nucleus during Fusarium Head Blight

Authors: Ayilalath, S., Faurie, L., Vanrobays, E., Rocher, F., Loizeau, L., Philippe, G., Javelle, M., Bosio, M., Sallaud, C., Tatout, C., BONHOMME, L.

Date: 2025-02-08 · Version: 1

DOI: 10.1101/2025.02.05.636710

Model Organism: Triticum aestivum

Fusarium graminearum nuclear‑localized effectors yeast two‑hybrid wheat beta‑amylase 2 structural modeling

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