Keywords: paralog processing, ascorbate, transcriptome analysis, SWI3, elemental analysis

Latest 10 Papers

Transcriptome and hormone regulations shape drought stress-dependent Fusarium Head Blight susceptibility in different barley genotypes

Authors: Hoheneder, F., Steidele, C. E., Gigl, M., Dawid, C., Hueckelhoven, R.

Date: 2025-11-25 · Version: 1

DOI: 10.1101/2025.11.23.689882

Model Organism: Hordeum vulgare

Fusarium Head Blight drought stress barley hormone profiling transcriptome analysis

Aggressive nitrogen assimilation during exponential growth in Chlamydomonas reinhardtii

Authors: Tibule, M., Mallawarachchi, W., Oyateru, O., Ziaeian, M., Kim, M., Dharmasiri, H. N., Lee, J.-H.

Date: 2025-11-04 · Version: 1

DOI: 10.1101/2025.11.02.686124

Model Organism: Chlamydomonas reinhardtii

nitrogen use strategies Chlamydomonas reinhardtii nitrogen assimilation transcriptome analysis nitrogen storage

SWI3 regulates male sex determination in Marchantia polymorpha

Authors: Quiles, M. L., Raval, P. K., Rensing, S. A., Gould, S. B.

Date: 2025-10-30 · Version: 1

DOI: 10.1101/2025.10.29.685095

Model Organism: Marchantia polymorpha

SWI3 chromatin regulation Marchantia polymorpha gametangiophore development transcriptomics

Maternal Light and Temperature Modulate Seed Longevity in Arabidopsis

Authors: Mazhari Azad, S., Gill Villar, D., Yordan, E., Mestre Pluvinet, P., Forment, J., Tarraga Herrero, S., Gonzalez, C., Ninoles Rodenes, R., Gadea, J.

Date: 2025-10-19 · Version: 1

DOI: 10.1101/2025.10.19.683148

Model Organism: Arabidopsis thaliana

seed longevity maternal environment effect Arabidopsis thaliana temperature and light interaction transcriptome analysis

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

An evolutionary leap in plant reproduction: From archegonia and motile sperm to embryo sacs and pollen tubes

Authors: Chen, D., Tang, L., Wang, F., Zhang, M., Zheng, S., Xia, M., Wu, Q., Cao, M., Jia, P., Guo, Y., Chen, F., Peng, X., Hu, J., Sun, M., Li, H., Zhang, L., Yang, W.

Date: 2025-08-06 · Version: 1

DOI: 10.1101/2025.08.04.668594

Model Organism: Ginkgo biloba

Ginkgo biloba reproductive transition transcriptome analysis pollen tube guidance MYB98-CRP-ECS module

Physiological characterization in a somaclonal mutant for fruit shape derived from persimmon 'Hiratanenashi'

Authors: Horiuchi, A., Matsuzaki, R., Onoue, N., Ushijima, K., Kubo, Y., Akagi, T., Minamikawa, M. F.

Date: 2025-05-19 · Version: 1

DOI: 10.1101/2025.05.19.654774

Model Organism: Diospyros kaki

fruit shape persimmon (Diospyros kaki)elliptic Fourier descriptor transcriptome analysis WOX13

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

MYB93 regulates responses to environmental sulphur in Arabidopsis and tomato.

Authors: Cao, X., Wilkinson, H. B., Hutton, B., McMulkin, N., Graham, N. S., Etherington, R., Oliver, A. G., Clayton, C. M., Kaur, H., Coates, J. C.

Date: 2025-03-07 · Version: 1

DOI: 10.1101/2025.03.04.641362

Model Organism: Arabidopsis thaliana

sulfur nutrition AtMYB93 root development transcriptome analysis elemental analysis

Transcriptome differentiation in Cryptomeria japonica trees with different origins growing in the north and south of Japan

Authors: Ujino-Ihara, T., Uchiyama, K., Kanetani, S., Suyama, Y., Tsumura, Y.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.22.639673

Model Organism: Cryptomeria japonica

local adaptation transcriptome analysis weighted gene co‑expression network analysis (WGCNA)SNP differentiation defense response genes