Keywords: paralog processing, ascorbate, transcriptome reprogramming, hormone signaling

Latest 10 Papers

MicroRNA166-HD-ZIP III module impacts tuber shape, color and productivity in potato

Authors: Patil, N. S., Vasav, A., Kumari, J., Arora, G., Natarajan, B., Banerjee, A. K.

Date: 2025-11-20 · Version: 1

DOI: 10.1101/2025.11.20.685984

Model Organism: Solanum tuberosum

miR166 HD-ZIP III transcription factors potato tuberization anthocyanin accumulation hormone signaling

Methionine Triggers Metabolic, Transcriptional, and Epigenetic Reprogramming in Arabidopsis Leaves

Authors: Yerushalmy, Y., Dafni, M., Rabach, N., Hacham, Y., Amir, R.

Date: 2025-11-03 · Version: 1

DOI: 10.1101/2025.11.02.686087

Model Organism: Arabidopsis thaliana

methionine metabolism Arabidopsis thaliana DNA methylation transcriptome reprogramming stress hormone pathways

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Diversification and conservation of DNA binding specificities of SPL family of transcription factors

Authors: Li, M., Yao, T., Galli, M., Di Costanzo, L. F., Lin, W., Zhou, Y., Chen, J.-G., Gallavotti, A., Huang, S.-s. C.

Date: 2025-10-01 · Version: 2

DOI: 10.1101/2024.09.13.612952

Model Organism: Arabidopsis thaliana

SPL transcription factors DNA affinity purification sequencing motif divergence hormone signaling plant development

Co-repressor AtSDR4L and paralog regulate hormonal and hypoxia responses in multiple Arabidopsis seed compartments

Authors: Lu, B., Go, D., Shan, J., Song, L.

Date: 2025-09-27 · Version: 2

DOI: 10.1101/2024.11.29.626136

Model Organism: Arabidopsis thaliana

seed dormancy germination regulation transcriptional co‑repressors MADS‑box transcription factors hormone signaling

Transcriptomics uncovers molecular mechanisms underlying salt-inhibited root growth in Festuca rubra

Authors: Lan, B., Ru, D., Du, F. K., Yin, K.

Date: 2025-07-26 · Version: 1

DOI: 10.1101/2025.07.22.665687

Model Organism: Festuca rubra

salt stress root growth inhibition Festuca rubra transcriptomics hormone signaling

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

SnRK1.1 Coordinates Organ-Specific Growth-Defense Programs via Transcriptomic Rewiring in Arabidopsis thaliana

Authors: Kalachova, T., Muller, K., Lacek, J., Pree, S., Antonova, A., Bondarenko, O., Burketova, L., Retzer, K., Weckwerth, W.

Date: 2025-04-29 · Version: 1

DOI: 10.1101/2025.04.25.650715

Model Organism: Arabidopsis thaliana

SnRK1 KIN10 transcriptome reprogramming plant immunity tissue-specific signaling

Analysing the Role of KIN10 in Directional Root Growth Regulation in Arabidopsis thaliana

Authors: Retzer, K., Garcia-Gonzalez, J., Muller, K., Lacek, J., Pree, S., Friedl, N., Weckwerth, W.

Date: 2025-04-29 · Version: 1

DOI: 10.1101/2025.04.25.650732

Model Organism: Arabidopsis thaliana

SnRK1 KIN10 carbon availability root growth regulation hormone signaling transcriptomic reprogramming

Xylan modifications in Populus that lead to increased growth

Authors: Urbancsok, J., Donev, E. N., Derba-Maceluch, M., Sivan, P., Barbut, F. R., Mitra, M., Yassin, Z., Cermanova, K., Simura, J., Karady, M., Scheepers, G., Mellerowicz, E. J.

Date: 2025-04-01 · Version: 1

DOI: 10.1101/2025.03.31.646328

Model Organism: Populus (aspen)

secondary cell wall xylan modification tension wood hormone signaling growth regulation