Keywords: paralog processing, ascorbate, transcriptomic analysis, phosphorylation, SWI3, DDM1

Latest 22 Papers

DECREASE IN DNA METHYLATION 1-mediated epigenetic regulation maintains gene expression balance required for heterosis in Arabidopsis thaliana

Authors: Matsuo, K., Wu, R., Yonechi, H., Murakami, T., Takahashi, S., Kamio, A., Akter, M. A., Kamiya, Y., Nishimura, K., Matsuura, T., Tonosaki, K., Shimizu, M., Ikeda, Y., Kobayashi, H., Seki, M., Dennis, E. S., Fujimoto, R.

Date: 2025-08-26 · Version: 1

DOI: 10.1101/2025.08.21.671646

Model Organism: Arabidopsis thaliana

heterosis DNA methylation DDM1 Arabidopsis thaliana transcriptomics

ABI5 Binding Proteins are substrates of key components in the ABA core signaling pathway

Authors: Finkelstein, R. R., Lynch, T., Erickson McNally, B. J., Losic, T., Lundquist, J.

Date: 2025-08-16 · Version: 2

DOI: 10.1101/2024.10.11.617944

Model Organism: Arabidopsis thaliana

ABA signaling ABI5‑Binding Proteins phosphorylation SnRK2 kinases protein stability

Gain and loss of gene function shaped the nickel hyperaccumulation trait in Noccaea caerulescens

Authors: Belloeil, C., Garcia de la Torre, V. S., Contreras Aguilera, R., Kupper, H., Lopez-Roques, C., Iampetro, C., Vandecasteele, C., Klopp, C., Launay-Avon, A., Leemhuis, W., Yamjabok, J., van den Heuvel, J., Aarts, M. G. M., Quintela Sabaris, C., Thomine, S., MERLOT, S.

Date: 2025-07-25 · Version: 1

DOI: 10.1101/2025.07.22.664359

Model Organism: Noccaea caerulescens

nickel hyperaccumulation Noccaea caerulescens genome assembly transcriptomic analysis metal transporters

MdBRC1 and MdFT2 Interaction Fine-Tunes Bud Break Regulation in Apple

Authors: Gioppato, H. A., Estevan, J., Al Bolbol, M., Soriano, A., Garighan, J., Jeong, K., Georget, C., Soto, D. G., El Khoury, S., Falavigna, V. d. S., George, S., Perales, M., Andres, F.

Date: 2025-06-24 · Version: 1

DOI: 10.1101/2025.06.20.660803

Model Organism: Malus domestica

bud dormancy MdBRC1 MdFT2 transcriptomic analysis protein interaction

Constitutive expression of full-length or partial of SOC1 genes for yield enhancement in tomato

Authors: Danial, G. H., Jaikham, J., Song, G.-q.

Date: 2025-06-06 · Version: 1

DOI: 10.1101/2025.06.03.657751

Model Organism: Solanum lycopersicum

SOC1 tomato fruit yield heterologous gene expression branching transcriptomic analysis

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

G3BP1 Phosphorylation Regulates Plant Immunity in Arabidopsis

Authors: Hirt, H., Abdulhakim, F., Abdulfaraj, A., Rayapuram, N.

Date: 2025-05-08 · Version: 1

DOI: 10.1101/2025.05.06.652493

Model Organism: Arabidopsis thaliana

MAPK signaling AtG3BP1 phosphorylation plant immunity stomatal defense

A moss N-Acetyltransferase-MAPK protein controls 2D to 3D developmental transition via acetylation and phosphorylation changes

Authors: de Luxan Hernandez, C., Ammitsoe, T. J., Kanne, J. V., Stanimirovic, S., Roux, M., Weeks, Z., Schutzbier, M., Dürnberger, G., Roitinger, E., Zhang, L., Spadiut, O., Ishikawa, M., Hasebe, M., Moody, L., Dagdas, Y., Rodriguez, E., Petersen, M.

Date: 2025-05-03 · Version: 1

DOI: 10.1101/2025.05.02.650421

Model Organism: Physcomitrium patens

post-translational modifications acetylation phosphorylation 2D-to-3D transition Physcomitrium patens

TIR immune signaling is blocked by phosphorylation to maintain plant growth

Authors: Li, J., Chen, S., Yu, B., Li, Q., Liu, R., Wang, Z., Wan, L., Zhao, Y.

Date: 2025-04-10 · Version: 1

DOI: 10.1101/2025.04.09.647920

Model Organism: Multi-species

TIR domain NADase activity phosphorylation Ca2+-dependent protein kinase growth‑defense trade‑off

B4 Raf-like MAPKKK RAF24 regulates Arabidopsis thaliana flowering time through HISTONE MONO-UBIQUITINATION 2

Authors: Li, Q., Wang, L., Grubb, L. E., Talasila, M., Rodriguez Gallo, M. C., Mehta, D., Scandola, S., Uhrig, R. G.

Date: 2025-04-01 · Version: 2

DOI: 10.1101/2024.06.12.598286

Model Organism: Arabidopsis thaliana

flowering time RAF24 MAPKKK phosphorylation HUB2

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