Keywords: paralog processing, bread wheat, pathogen compatibility, SNP markers

Latest 8 Papers

Transcriptional responses of Solanum lycopersicum to three distinct parasites reveal host hubs and networks underlying parasitic successes

Authors: Truch, J., Jaouannet, M., Da Rocha, M., Kulhanek-Fontanille, E., Van Ghelder, C., Rancurel, C., Migliore, O., Pere, A., Jaubert, S., Coustau, C., Galiana, E., Favery, B.

Date: 2026-01-23 · Version: 1

DOI: 10.64898/2026.01.22.701158

Model Organism: Solanum lycopersicum

tomato pathogen compatibility transcriptomics co‑expression network Arabidopsis interactome

Root phenolics as potential drivers of preformed defenses and reduced disease susceptibility in a paradigm bread wheat mixture

Authors: Mathieu, L., Chloup, A., Marty, S., Savajols, J., Paysant-Le Roux, C., Launay-Avon, A., Martin, M.-L., Totozafy, J.-C., Perreau, F., Rochepeau, A., Rouveyrol, C., Petriacq, P., Morel, J.-B., Meteignier, L.-V., Ballini, E.

Date: 2026-01-14 · Version: 1

DOI: 10.64898/2026.01.13.699261

Model Organism: Triticum aestivum

root-mediated interactions bread wheat Septoria tritici blotch transcriptomics metabolomics

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Genomic prediction of disease resistance provides a path to marker assisted restoration in a wetland foundation tree species

Authors: Guo, K., Ahrens, C. W., Chen, S. H., Sandhu, K., Rossetto, M., Jones, A., Tan, C., Borevitz, J. O., Edwards, R. J., Bragg, J. G.

Date: 2025-09-17 · Version: 1

DOI: 10.1101/2025.09.14.675737

Model Organism: Melaleuca quinquenervia

myrtle rust Melaleuca quinquenervia Genome Wide Association Study disease resistance SNP markers

Controlling GRF4-GIF1 Expression for Efficient, Genotype-Independent Transformation Across Wheat Cultivars

Authors: Hayta, S., Smedley, M. A., Bayraktar, M., Forner, M., Backhaus, A., Lister, C., Clarke, M., Uauy, C., Griffiths, S.

Date: 2025-09-02 · Version: 1

DOI: 10.1101/2025.08.29.673042

Model Organism: Triticum aestivum

GRF4‑GIF1 fusion Agrobacterium-mediated transformation genotype‑independent regeneration bread wheat transformation efficiency

Predicting flowering time using integrated morphophysiological and genomic data with machine learning models

Authors: Babaei, M., Nemati, H., Arouiee, H., Torkamaneh, D.

Date: 2025-08-13 · Version: 1

DOI: 10.1101/2025.08.11.669697

Model Organism: Cannabis sativa

flowering time Cannabis sativa genotyping-by-sequencing machine learning SNP markers

Whole genome sequencing-based multi-locus association mapping for kernel iron, zinc and protein content in groundnut

Authors: Sagar, U. N., Parmar, S., Gangurde, S. S., Sharma, V., Pandey, A. K., Mohinuddin, D. K., Dube, N., Bhat, R. S., John, K., Sreevalli, M. D., Rani, P. S., Singh, K., Varshney, R. K., Pandey, M. K.

Date: 2025-08-05 · Version: 1

DOI: 10.1101/2025.08.04.668427

Model Organism: Arachis hypogaea

groundnut nutritional quality GWAS SNP markers KASP

Omics-driven Identification of Candidate Genes and SNP markers in a Major QTL Controlling Early Heading in Rice

Authors: Rao, D., T, N. S., CG, G., Gaur, N., Jamaloddin, M., Maganti, S. M., Raman, M. S., Patel, H. K., Tiwari, S., Sonti, R. V.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.25.645207

Model Organism: Oryza sativa

heading date rice (Oryza sativa)QTL-seq SNP markers transcriptomics