Keywords: paralog processing, codon usage, CLPC2, thylakoid ultrastructure

Latest 8 Papers

Charge reversal at the Lhcb2 N-terminus impairs phosphorylation and PSI-LHCII complex formation

Authors: Srivastava, A., Schiphorst, C., Berentsen, J., Verhoeven, D., Leeuwen, J. v., Longoni, F., Saccon, F., Wientjes, E.

Date: 2025-12-25 · Version: 1

DOI: 10.64898/2025.12.25.696481

Model Organism: Arabidopsis thaliana

state transitions Lhcb2 N‑terminal charge phosphorylation Arabidopsis thaliana thylakoid ultrastructure

CLPC2 plays specific roles in CLP complex-mediated regulation of growth, photosynthesis, embryogenesis and response to growth-promoting microbial compounds

Authors: Leal-Lopez, J., Bahaji, A., De Diego, N., Tarkowski, P., Baroja-Fernandez, E., Munoz, F. J., Almagro, G., Perez, C. E., Bastidas-Parrado, L. A., Loperfido, D., Caporalli, E., Ezquer, I., Lopez-Serrano, L., Ferez-Gomez, A., Coca-Ruiz, V., Pulido, P., Morcillo, R. J. L., Pozueta-Romero, J.

Date: 2025-11-28 · Version: 1

DOI: 10.1101/2025.11.25.690394

Model Organism: Arabidopsis thaliana

CLPC2 microbial volatile compounds chloroplast CLP protease proteomics Arabidopsis thaliana

Daily Heat Stress Induces Accumulation of Non-functional PSII-LHCII and Donor-side Limitation of PSI via Downregulation of the Cyt bf Complex in Arabidopsis thaliana

Authors: Laihonen, L., Tomberg, T., Vuorijoki, L., Mulo, P., Rantala, M.

Date: 2025-11-08 · Version: 1

DOI: 10.1101/2025.11.06.687104

Model Organism: Arabidopsis thaliana

heat stress thylakoid ultrastructure photosystem II cytochrome b6f Arabidopsis thaliana

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Light on its feet: Acclimation to high and low diurnal light is flexible in Chlamydomonas reinhardtii

Authors: Dupuis, S., Chastain, J. L., Han, G., Zhong, V., Gallaher, S. D., Nicora, C. D., Purvine, S. O., Lipton, M. S., Niyogi, K. K., Iwai, M., Merchant, S. S.

Date: 2025-09-02 · Version: 1

DOI: 10.1101/2025.08.28.672467

Model Organism: Chlamydomonas reinhardtii

photoprotection diurnal light acclimation thylakoid ultrastructure transcriptomics proteomics

Thriving Across Depths: How Blue Light Shapes a Large PSI Supercomplex and Specic Photosynthetic Traits in the seagrass Posidonia oceanica.

Authors: Charras Ferroussier, Q., Mathiot, C., Semchonok, D. A., Elias, E., Bhatti, A. F., Lebrun, R., Guillemain, D., Siponen, M., Croce, R., Jungas, C.

Date: 2025-06-24 · Version: 1

DOI: 10.1101/2025.06.20.660723

Model Organism: Posidonia oceanica

Posidonia oceanica photosynthetic adaptation PSI-LHCII supercomplex thylakoid ultrastructure depth-dependent light spectra

Revisiting the Central Dogma: the distinct roles of genome, methylation, transcription, and translation on protein expression in Arabidopsis thaliana

Authors: Zhong, Z., Bailey, M., Kim, Y.-I., Pesaran-Afsharyan, N., Parker, B., Arathoon, L., Li, X., Rundle, C. A., Behrens, A., Nedialkova, D. D., Slavov, G., Hassani-Pak, K., Lilley, K. S., Theodoulou, F. L., Mott, R.

Date: 2025-03-31 · Version: 2

DOI: 10.1101/2025.01.08.631880

Model Organism: Arabidopsis thaliana

Arabidopsis thaliana codon usage gene expression DNA methylation ribosome profiling

Meltome Atlas of Arabidopsis thaliana Proteome: A Melting Temperature-Based Identification of Heat & Cold Resistant Proteins

Authors: Mohanta, T. K., Mohanta, K. M.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.22.639691

Model Organism: Arabidopsis thaliana

thermal stability melting temperature (Tm)Arabidopsis thaliana proteome codon usage gene duplication