Keywords: paralog processing, codon usage, transcriptome reprogramming, multi-omics, ascorbate, ethylene signaling

Latest 26 Papers

The functional divergence of two ethylene receptor subfamilies that exhibit Ca2+-permeable channel activity

Authors: Pan, C., Cheng, J., Lin, Z., Hao, D., Xiao, Z., Ming, Y., Song, W., Liu, L., Guo, H.

Date: 2025-11-29 · Version: 1

DOI: 10.1101/2025.11.28.691086

Model Organism: General

ethylene signaling subfamily I receptors Ca2+ influx epistasis hormone‑induced calcium channel

Methionine Triggers Metabolic, Transcriptional, and Epigenetic Reprogramming in Arabidopsis Leaves

Authors: Yerushalmy, Y., Dafni, M., Rabach, N., Hacham, Y., Amir, R.

Date: 2025-11-03 · Version: 1

DOI: 10.1101/2025.11.02.686087

Model Organism: Arabidopsis thaliana

methionine metabolism Arabidopsis thaliana DNA methylation transcriptome reprogramming stress hormone pathways

Enterobacter sp. SA187-induced coordinated regulation of high-affinity nitrate transporters and ethylene signaling enhances nitrogen content and plant growth under low nitrate

Authors: Ilyas, A., Mauve, C., Decouard, B., Caius, J., Paysant-Leroux, C., Hodges, M., de Zelicourt, A.

Date: 2025-10-26 · Version: 2

DOI: 10.1101/2025.06.23.660384

Model Organism: Arabidopsis thaliana

Enterobacter sp. SA187 low nitrate nutrition ethylene signaling high-affinity nitrate transporters plant‑growth‑promoting bacteria

Ethylene receptors are functionally conserved in calcium permeability across the green lineage

Authors: Yu, D., Ju, C., Feng, C., Wang, Y., Sun, Y., Gao, L., Liu, Z., Li, C., Wang, Y., He, X., Su, H., Hu, M., Meng, J., Tian, S., Liu, L., Hou, C., Kong, D., Li, L.

Date: 2025-10-20 · Version: 1

DOI: 10.1101/2025.10.20.683334

Model Organism: Arabidopsis thaliana

ethylene signaling Ca2+ permeability ETR1 receptor Arabidopsis thaliana conserved plant signaling

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Ethylene-induced host responses enhance resistance against the root-parasitic plant Phelipanche aegyptiaca

Authors: Park, S., Yang, C., Westwood, J.

Date: 2025-10-06 · Version: 1

DOI: 10.1101/2025.10.05.680554

Model Organism: Multi-species

Phelipanche aegyptiaca ethylene signaling host resistance parasitic weed Arabidopsis thaliana

Predicting complex phenotypes using multi-omics data in maize

Authors: Creach, M., Webster, B., Newton, L., Turkus, J., Schnable, J., Thompson, A., VanBuren, R.

Date: 2025-10-01 · Version: 1

DOI: 10.1101/2025.09.30.679283

Model Organism: Zea mays

multi-omics trait prediction transcriptomics phenomics genotype-by-environment interaction

Type one protein phosphatases (TOPPs) catalyze EIN2 dephosphorylation to regulate ethylene signaling in Arabidopsis

Authors: Su, M., Qin, Q., Zhang, J., Li, Y., Ye, A., Wang, S., Hou, S.

Date: 2025-09-29 · Version: 1

DOI: 10.1101/2025.09.26.678716

Model Organism: Arabidopsis thaliana

TOPPs EIN2 ethylene signaling dephosphorylation salt tolerance

Pioneer bark beetle attacks induce multifaceted localized defense responses in Norway spruce

Authors: Ramires, M. J., Netherer, S., Schebeck, M., Hummel, K., Schlosser, S., Razzazi-Fazeli, E., Ertl, R., Ahmad, M., Espinosa-Ruiz, A., Carrera, E., Arc, E., Martinez-Godoy, M. A., Banos, J., Caballero, T., Ledermann, T., van Loo, M., Trujillo-Moya, C.

Date: 2025-08-07 · Version: 1

DOI: 10.1101/2025.08.06.668443

Model Organism: Picea abies

Norway spruce bark beetle defense multi-omics jasmonic acid phenolic compounds

A hierarchical abscission program regulates reproductive allocation in Prunus yedoensis and Prunus sargentii

Authors: Jeon, W.-T., Kim, J.-A., Cheon, A., Lee, S. S. Y., Kang, J., Lee, J.-M., Lee, Y.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.08.663657

Model Organism: Prunus yedoensis, Prunus sargentii

organ abscission abscission zone ethylene signaling reactive oxygen species Prunus reproductive biology

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