Keywords: paralog processing, comparative transcriptomics, CO2-fixing enzyme, Arabidopsis thaliana

Latest 255 Papers

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

A simple method to efficiently generate structural variation in plants

Authors: Bechen, L. L., Ahsan, N., Bahrainwala, A., Gehring, M., Rajavasireddy, S.

Date: 2025-05-14 · Version: 2

DOI: 10.1101/2024.12.20.629831

Model Organism: Arabidopsis thaliana

structural variation etoposide treatment Arabidopsis thaliana long‑read sequencing phenotypic alteration

Two long non-coding RNAs, SVALKA and SVALNA, regulate CBF1 and CBF3 via multiple mechanisms

Authors: Rosenkranz, I., Mermet, S., Zacharaki, V., Kindgren, P.

Date: 2025-05-11 · Version: 1

DOI: 10.1101/2025.05.09.653013

Model Organism: Arabidopsis thaliana

long non-coding RNA Arabidopsis thaliana cold stress CBF transcription factors RNAPII collision

Integrative analysis of plant responses to a combination of water deficit, heat stress and eCO2 reveals a role for OST1 and SLAH3 in regulating stomatal responses

Authors: Pelaez-Vico, M. A., Sinha, R., Ghani, A., Lopez-Climent, M. F., Joshi, T., Fritschi, F. B., Zandalinas, S. I., Mittler, R.

Date: 2025-05-11 · Version: 1

DOI: 10.1101/2025.05.07.652739

Model Organism: Arabidopsis thaliana

Global Change Factor combination stomatal aperture regulation Arabidopsis thaliana water deficit heat stress

bHLH35 mediates specificity in plant responses to multiple stress conditions

Authors: Sinha, R., Zandalinas, S. I., Pelaez-Vico, M. A., Ghani, A., Khan, M. A., Induri, S. P., Bereimipour, A., Ghandour, T., Ogden, A., Huang, S.-S. C., Azad, R., Mendoza, D. G., Joshi, T., Fritschi, F. B., Mittler, R.

Date: 2025-05-11 · Version: 1

DOI: 10.1101/2025.05.07.652729

Model Organism: Arabidopsis thaliana

bHLH35 combined abiotic stress Arabidopsis thaliana protein‑protein interaction stress‑specific transcriptional regulation

POLYGALACTURONASES REGULATED BY AUXIN facilitate root cell elongation in Arabidopsis thaliana via pectin remodeling

Authors: Kubalova, M., Kampova, A., Vosolsobe, S., Raabe, K., Simonaviciene, B., Benitez-Alfonso, Y., Muller, K., Medvecka, E., Fendrych, M.

Date: 2025-05-11 · Version: 1

DOI: 10.1101/2025.05.07.652666

Model Organism: Arabidopsis thaliana

auxin signaling root cell elongation pectin remodeling polygalacturonases Arabidopsis thaliana

The Arabidopsis WAVE/SCAR Protein BRICK1 Associates with Cell Edges and Plasmodesmata

Authors: Ambrose, C., Chi, Z.

Date: 2025-05-08 · Version: 1

DOI: 10.1101/2025.05.06.652582

Model Organism: Arabidopsis thaliana

plasmodesmata BRK1 WAVE/SCAR complex ARP2/3-mediated actin nucleation Arabidopsis thaliana

Liquid-phase determination of Arabidopsis respiration and photosynthesis using Clark-type O2 electrodes

Authors: Sena, F., Couture, C., Berais-Rubio, A., Millar, A. H., Signorelli, S.

Date: 2025-05-06 · Version: 1

DOI: 10.1101/2025.05.04.652138

Model Organism: Arabidopsis thaliana

Photosynthesis Respiration Clark-type oxygen electrode Arabidopsis thaliana Abiotic stress

SNRK3.15 is a crucial component of the sulfur deprivation response in Arabidopsis thaliana

Authors: Apodiakou, A., Heyneke, E., Alseekh, S., Pinsorn, P., Metzger, S., Kopriva, S., Schulze, W., Hoefgen, R., Whitcomb, S. J.

Date: 2025-05-03 · Version: 1

DOI: 10.1101/2025.04.29.651231

Model Organism: Arabidopsis thaliana

sulfate deprivation CIPK14/SNRK3.15 Arabidopsis thaliana kinase signaling proteomics

Acclimation of carbon metabolism to a changing environment across a leaf rosette of Arabidopsis thaliana

Authors: Brodsky, V., Kerscher, A., Urban, M., Naegele, T.

Date: 2025-05-03 · Version: 1

DOI: 10.1101/2025.04.29.651223

Model Organism: Arabidopsis thaliana

Arabidopsis thaliana leaf-specific acclimation photosynthesis carbon metabolism carbon balance modeling

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