Keywords: paralog processing, comparative transcriptomics, Triticum aestivum

Latest 22 Papers

Network analysis of flowering time genes suggests regulatory changes among SOC1 orthologues in response to cold in Brassica napus

Authors: Sidhu, G. S., Burrows, S., Woolfenden, H., Wells, R., Morris, R. J.

Date: 2026-01-20 · Version: 2

DOI: 10.64898/2025.12.16.694548

Model Organism: Brassica napus

flowering time gene regulatory network comparative transcriptomics Brassica napus subfunctionalisation

Wheat diversity reveals new genomic loci and candidate genes for vegetation indices using genome-wide association analysis

Authors: Rustamova, S., Jahangirov, A., Leon, J., Naz, A. A., Huseynova, I.

Date: 2026-01-14 · Version: 1

DOI: 10.64898/2026.01.14.699455

Model Organism: Triticum aestivum

Triticum aestivum drought stress spectral vegetation indices GWAS QTL hotspot

Expanding the TaNAS gene family in bread wheat and exploring potential for intragenic biofortification

Authors: Carey-Fung, O., Beasley, J. T., Josua Felix, E., Tarry-Smith, L., Leckie, N., Callahan, D. L., Appels, R., Johnson, A. A. T.

Date: 2025-12-09 · Version: 1

DOI: 10.64898/2025.12.07.692865

Model Organism: Triticum aestivum

Nicotianamine synthase Triticum aestivum Iron and zinc biofortification Gene overexpression Metal homeostasis

DNA methylation mediates transcriptional stability and transposon-driven trans-regulation under drought in wheat

Authors: Reynolds, I. J., Barratt, L. J., Harper, A. L.

Date: 2025-12-05 · Version: 1

DOI: 10.64898/2025.12.04.692301

Model Organism: Triticum aestivum

drought stress DNA methylation Triticum aestivum ROS1a demethylase transposable elements

Root anatomical gradients and cultivar differences underlie variation in root hydraulic properties in German winter wheat

Authors: Baca Cabrera, J. C., Jones, D. H., Vanderborght, J., Behrend, D., Schneider, H., Lobet, G.

Date: 2025-11-19 · Version: 1

DOI: 10.1101/2025.11.19.689226

Model Organism: Triticum aestivum

root hydraulic conductance crown roots Triticum aestivum high-throughput imaging GRANAR-MECHA modeling

Antirrhinum flower shape: unravelling gene expression across developmental axes and boundaries

Authors: Cunha, A. M., Raimundo, J., Verweij, A., Bradley, D., Coen, E., Costa, M. M. R.

Date: 2025-11-11 · Version: 1

DOI: 10.1101/2025.11.10.687484

Model Organism: Antirrhinum majus

Antirrhinum majus dorsoventral axis patterning comparative transcriptomics AmCYC/AmDIV transcription factors NGATHA‑LIKE1‑miR164 regulatory module

Symbiotic diversification relies on an ancestral gene network in plants

Authors: Castanedo, L., Melkonian, K., Vernie, T., Chauderon, L., Pellen, T., Bianconi, M., Lefort, C., Libourel, C., Le Ru, A., Aziz, S., Latorre, C., Thiercelin, O., Rodde, N., Cauet, S., Callot, C., Forrest, L., Nishiyama, T., Wickell, D., Li, F.-W., Keller, J., Delaux, P.-M.

Date: 2025-11-03 · Version: 2

DOI: 10.1101/2025.04.01.646537

Model Organism: Marchantia paleacea

ericoid mycorrhizae intracellular symbiosis ancestral gene module liverwort comparative transcriptomics

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Explainable AI shows climate impacts on wheat yields: insights from 30 years of field data.

Authors: Visse-Mansiaux, M., Ryo, M., Burton, A., Siraj, T., Schiller, J., Treier, S., Pellet, D., Stefan, L., Levy Haener, L., Herrera, J. M., Wanger, T. C.

Date: 2025-09-21 · Version: 1

DOI: 10.1101/2025.09.19.677331

Model Organism: Triticum aestivum

Triticum aestivum climate-driven yield variability explainable artificial intelligence gradient boosting genotype‑by‑environment interaction

Choosing the Best Route: Comparative Optimization of Wheat Transformation Methods for Improving Yield by Targeting TaARE1-D with CRISPR/Cas9

Authors: Tek, M. I., Budak Tek, K., Sarikaya, P., Ahmed, A. R., Fidan, H.

Date: 2025-09-12 · Version: 1

DOI: 10.1101/2025.09.11.675438

Model Organism: Triticum aestivum

Triticum aestivum CRISPR/Cas9 Agrobacterium-mediated transformation TaARE1-D yield improvement

Page 1 of 3Next