Keywords: paralog processing, comparative transcriptomics, alternative splicing, drought stress

Latest 59 Papers

Identification of a volatile chemotype associated with resilience to water stress in domesticated varieties of Cotton

Authors: Frost, C., Johnson, S., Pauli, D., Melandri, G.

Date: 2025-07-21 · Version: 1

DOI: 10.1101/2025.07.16.665191

volatile organic compounds chemotype drought stress Gossypium hirsutum sesquiterpenes

Contrasting needle physiological strategies to soil nutrient scarcity in radiata pine plantations

Authors: Ruiz de Larrinaga, L., San Miguel-Oti, F., Monasterio, A., Artetxe, U., Munne-Bosch, S., Mesa, T., Moreaux, C., Ortega-Barrueta, U., Sertutxa, U., Pena, L., Ametzaga, I., Yuste, J. C., Esteban, R.

Date: 2025-07-19 · Version: 1

DOI: 10.1101/2025.07.15.664982

Model Organism: Pinus radiata

Pinus radiata soil nutrient scarcity drought stress photosynthetic performance forest management

Integrative Multi-Omics Analysis Reveals Stress-Specific Molecular Architectures in Soybean under Drought and Rust Infection

Authors: Husein, G., Castro-Moretti, F. R., Prado, M., Amorim, L., Mazzafera, P., Canales, J., Monteiro-Vitorello, C. B.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.07.663534

Model Organism: Glycine max

Asian soybean rust drought stress transcriptomics metabolomics co-expression network

Drought stress modulates the molecular response of Arabidopsis plants to root-knot nematode infection

Authors: Refaiy, A., Lilley, C. J., Atkinson, N. J., Urwin, P. E.

Date: 2025-06-09 · Version: 1

DOI: 10.1101/2025.06.05.658137

Model Organism: Arabidopsis thaliana

combined biotic and abiotic stress drought stress root‑knot nematode (Meloidogyne incognita)RNA‑Seq transcriptomics Arabidopsis thaliana

Endophytes induce systemic spatial reprogramming of metabolism in poplar roots under drought

Authors: Aufrecht, J. A., Velickovic, D., Tournay, R., Couvillion, S. P., Balasubramanian, V. K., Winkler, T., Herrera, D., Stanley, R., Doty, S., Ahkami, A. H.

Date: 2025-06-06 · Version: 1

DOI: 10.1101/2025.06.02.657501

Model Organism: General

beneficial endophytes drought stress root metabolome chemical imaging machine learning

Prediction of harvest-related traits in barley using high-throughput phenotyping data and machine learning

Authors: Tietze, H., Abdelhakim, L., Pleskacova, B., Kurtz-Sohn, A., Fridman, E., Nikoloski, Z., Panzarova, K.

Date: 2025-06-02 · Version: 1

DOI: 10.1101/2025.05.29.656856

Model Organism: Hordeum vulgare

high‑throughput phenotyping drought stress temporal modeling Barley (Hordeum vulgare)RGB imaging

Chiral monoterpene dynamics of shoots and roots of Norway spruce in response to drought

Authors: Daber, L. E., Kreuzwieser, J., Meischner, M., Williams, J., Werner, C.

Date: 2025-05-03 · Version: 1

DOI: 10.1101/2025.05.02.651829

Model Organism: Picea abies

chiral monoterpenes drought stress Norway spruce de novo synthesis tissue‑specific emissions

2-Oxoglutarate-dependent dioxygenases contribute to cardenolide biosynthesis in Erysimum cheiranthoides (wormseed wallflower)

Authors: Younkin, G., Holland, C. K., Jander, G.

Date: 2025-04-16 · Version: 1

DOI: 10.1101/2025.04.10.648230

Model Organism: Erysimum cheiranthoides

cardenolide biosynthesis 2‑oxoglutarate‑dependent dioxygenases hydroxylation comparative transcriptomics enzyme modeling

Comparative transcriptomics uncovers plant and fungal genetic determinants of mycorrhizal compatibility

Authors: Marques-Galvez, J. E., de Freitas Pereira, M., Nehls, U., Ruytinx, J., Barry, K., Peter, M., Martin, F., Grigoriev, I. V., Veneault-Fourrey, C., Kohler, A.

Date: 2025-04-14 · Version: 1

DOI: 10.1101/2025.04.11.648352

Model Organism: Populus

ectomycorrhizal symbiosis poplar comparative transcriptomics gene regulons compatibility

High radiosensitivity in the conifer Norway spruce (Picea abies) due to lesscomprehensive mobilisation of protection and repair responses compared to the radiotolerant Arabidopsis thaliana

Authors: Bhattacharjee, P., Blagojevic, D., Lee, Y., Gillard, G. B., Gronvold, L., Hvidsten, T. R., Sandve, S. R., Lind, O. C., Salbu, B., Brede, D. A., Olsen, J. E.

Date: 2025-04-14 · Version: 3

DOI: 10.1101/2023.11.20.562501

Model Organism: Multi-species

ionising radiation radiosensitivity comparative transcriptomics DNA damage repair antioxidant response

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