Keywords: paralog processing, comparative transcriptomics, transcriptomics, Arabidopsis thaliana

Latest 282 Papers

GRAS salts and eastern hemlock extract: a dual approach to sustainable plant disease management‎‎

Authors: Soltaniband, V., Barrada, A., Delisle-Houde, M., Dorais, M., Tweddell, R. J., Michaud, D.

Date: 2025-11-08 · Version: 1

DOI: 10.1101/2025.11.07.687209

GRGRAS salts eastern hemlock extract Pseudomonas syringae pv. tomato DC3000 salicylic acid signaling Arabidopsis thaliana

Daily Heat Stress Induces Accumulation of Non-functional PSII-LHCII and Donor-side Limitation of PSI via Downregulation of the Cyt bf Complex in Arabidopsis thaliana

Authors: Laihonen, L., Tomberg, T., Vuorijoki, L., Mulo, P., Rantala, M.

Date: 2025-11-08 · Version: 1

DOI: 10.1101/2025.11.06.687104

Model Organism: Arabidopsis thaliana

heat stress thylakoid ultrastructure photosystem II cytochrome b6f Arabidopsis thaliana

Hydrogen sulfide modulates plant hypoxic responses through the persulfidation of Plant Cysteine Oxidases

Authors: Telara, Y., Akter, S., Aroca, A., Piccigallo, L., Zhang, D., Novi, G., Lavilla, M., Gunawardana, D., La Monaca, N., Lichtenauer, S., Gotor, C., Schwarzlaender, M., Perata, P., Flashman, E., Giuntoli, B.

Date: 2025-11-06 · Version: 1

DOI: 10.1101/2025.11.05.686772

Model Organism: Arabidopsis thaliana

hydrogen sulfide signaling hypoxia response protein persulfidation Plant Cysteine Oxidases Arabidopsis thaliana

Mechanistic insight into the oligomerisation of Arabidopsis CRY1 and its inhibition by BIC1

Authors: Just, A., Niemann, N., Gnau, P., Kock, D., Heimerl, T., Essen, L.-O., Batschauer, A., Morgner, N.

Date: 2025-11-06 · Version: 2

DOI: 10.1101/2025.10.06.680677

Model Organism: Arabidopsis thaliana

cryptochrome blue‑light signaling Arabidopsis thaliana oligomerization ATP regulation

The emerging contaminant Cl-PFESA/F-53B is toxic to meiotic cell division and reproduction in Arabidopsis thaliana

Authors: Chen, Y., Cui, X., Ren, Z., Fu, H., Luo, Y., Xu, L., Song, Z., Qin, Y., Yu, G., Lei, X., Liu, B.

Date: 2025-11-05 · Version: 1

DOI: 10.1101/2025.11.03.686200

Model Organism: Arabidopsis thaliana

F-53B Arabidopsis thaliana meiotic toxicity crossover reduction DNA double‑strand break

Blue Light Promotes Root Iron Acquisition via a Shoot CRY-HY5 Signaling Module in Arabidopsis.

Authors: Jakhar, P., Mankotia, S., Ladhwal, S., Bodh, N., Dhanawat, K., Pandey, A. K., Satbhai, S. B.

Date: 2025-11-03 · Version: 1

DOI: 10.1101/2025.11.02.686065

Model Organism: Arabidopsis thaliana

iron homeostasis blue light Arabidopsis thaliana HY5 transcription factor CRY1/CRY2 photoreceptors

Methionine Triggers Metabolic, Transcriptional, and Epigenetic Reprogramming in Arabidopsis Leaves

Authors: Yerushalmy, Y., Dafni, M., Rabach, N., Hacham, Y., Amir, R.

Date: 2025-11-03 · Version: 1

DOI: 10.1101/2025.11.02.686087

Model Organism: Arabidopsis thaliana

methionine metabolism Arabidopsis thaliana DNA methylation transcriptome reprogramming stress hormone pathways

Chloroplast- and Mitochondrion-Specific Random C-to-T Mutagenesis for Forward Genetics of Organelle Genomes

Authors: Kosaka, N., Harada, Y., Nakazato, I., Okuno, M., Itoh, T., Tsutsumi, N., Arimura, S.-i.

Date: 2025-11-03 · Version: 1

DOI: 10.1101/2025.11.01.685978

Model Organism: Arabidopsis thaliana

organellar base editing C-to-T mutagenesis plastid genome Arabidopsis thaliana spectinomycin resistance

Delineating Mutation Bias and Selection during Plant Development

Authors: Monroe, G., Lensink, M., Ahn, V., Davis, M. W., Oya, S., Zhao, K.

Date: 2025-11-03 · Version: 1

DOI: 10.1101/2025.11.01.686053

Model Organism: Arabidopsis thaliana

germline mutations purifying selection mutation bias Arabidopsis thaliana mutation-accumulation

Symbiotic diversification relies on an ancestral gene network in plants

Authors: Castanedo, L., Melkonian, K., Vernie, T., Chauderon, L., Pellen, T., Bianconi, M., Lefort, C., Libourel, C., Le Ru, A., Aziz, S., Latorre, C., Thiercelin, O., Rodde, N., Cauet, S., Callot, C., Forrest, L., Nishiyama, T., Wickell, D., Li, F.-W., Keller, J., Delaux, P.-M.

Date: 2025-11-03 · Version: 2

DOI: 10.1101/2025.04.01.646537

Model Organism: Marchantia paleacea

ericoid mycorrhizae intracellular symbiosis ancestral gene module liverwort comparative transcriptomics

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