Keywords: paralog processing, cotyledon function, transcriptome analysis, root development, proteomics

Latest 30 Papers

Physiological characterization in a somaclonal mutant for fruit shape derived from persimmon 'Hiratanenashi'

Authors: Horiuchi, A., Matsuzaki, R., Onoue, N., Ushijima, K., Kubo, Y., Akagi, T., Minamikawa, M. F.

Date: 2025-05-19 · Version: 1

DOI: 10.1101/2025.05.19.654774

fruit shape persimmon (Diospyros kaki)elliptic Fourier descriptor transcriptome analysis WOX13

SNRK3.15 is a crucial component of the sulfur deprivation response in Arabidopsis thaliana

Authors: Apodiakou, A., Heyneke, E., Alseekh, S., Pinsorn, P., Metzger, S., Kopriva, S., Schulze, W., Hoefgen, R., Whitcomb, S. J.

Date: 2025-05-03 · Version: 1

DOI: 10.1101/2025.04.29.651231

Model Organism: Arabidopsis thaliana

sulfate deprivation CIPK14/SNRK3.15 Arabidopsis thaliana kinase signaling proteomics

Balancing nutrient remobilization and photosynthesis: the dual role of lupin cotyledons after germination

Authors: Angermann, C., Heinemann, B., Bueno Nogueira, B., Mai, H.-J., Bauer, P., Hildebrandt, T. M.

Date: 2025-04-18 · Version: 1

DOI: 10.1101/2025.04.15.648908

Model Organism: Lupinus albus

nutrient remobilization cotyledon function white lupin proteomics nitrogen deficiency

Identification of MARVELlous Protein Markers for Phytophthora infestans Extracellular Vesicles

Authors: Breen, S., McLellan, H., Wang, W., Wang, S., Welsh, L., Pham, J., Whisson (SW), s., Boevink, P., Birch, P. R.

Date: 2025-04-14 · Version: 1

DOI: 10.1101/2025.04.11.648357

Model Organism: Phytophthora infestans

extracellular vesicles Phytophthora infestans RxLR effectors MARVEL domain proteins proteomics

Whats left from the brew? Investigating residual barley proteins in spent grains for downstream valorization opportunities

Authors: Gregersen Echers, S., Mikkelsen, R. K., Abdul-Khalek, N., Queiroz, L. S., Hobley, T. J., Schulz, B. L., Overgaard, M. T., Jacobsen, C., Yesiltas, B.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.26.645420

Model Organism: Barley (Hordeum vulgare)

Brewer's spent grain proteomics B3-Hordein allergenic proteins protein hydrolysis

Chemical Inhibition of Splicing-Related Protein Kinases Reveals Phosphorylation-Driven Regulation of RNA Alternative Splicing in Arabidopsis Seedlings

Authors: Rodriguez Gallo, M. C., Murray, C., Kennedy, C., Talasila, M., Bhatt, D., Steyer, J., Glover, M., Uhrig, R. G.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.24.644839

Model Organism: Arabidopsis thaliana

SR protein kinases alternative splicing root development chemical inhibition phosphoproteomics

MYB93 regulates responses to environmental sulphur in Arabidopsis and tomato.

Authors: Cao, X., Wilkinson, H. B., Hutton, B., McMulkin, N., Graham, N. S., Etherington, R., Oliver, A. G., Clayton, C. M., Kaur, H., Coates, J. C.

Date: 2025-03-07 · Version: 1

DOI: 10.1101/2025.03.04.641362

Model Organism: Arabidopsis thaliana

sulfur nutrition AtMYB93 root development transcriptome analysis elemental analysis

The ribosomal protein RPS6A modulates auxin signalling and root development in Arabidopsis

Authors: Pan, K., Hou, K., Kong, M., Tan, S.

Date: 2025-02-28 · Version: 1

DOI: 10.1101/2025.02.26.640312

Model Organism: Arabidopsis thaliana

RPS6A auxin signaling Arabidopsis thaliana root development PIN transporters

Transcriptome differentiation in Cryptomeria japonica trees with different origins growing in the north and south of Japan

Authors: Ujino-Ihara, T., Uchiyama, K., Kanetani, S., Suyama, Y., Tsumura, Y.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.22.639673

Model Organism: Cryptomeria japonica

local adaptation transcriptome analysis weighted gene co‑expression network analysis (WGCNA)SNP differentiation defense response genes

The Proteomics Landscape of Pattern Triggered Immunity in the Arabidopsis Leaf Apoplast

Authors: Chen, H.-C., Newton, C. J., Zheng, Y., Kong, F., Yao, Y., Yang, L., Kvitko, B. H.

Date: 2025-02-08 · Version: 1

DOI: 10.1101/2025.02.06.636724

Model Organism: Arabidopsis thaliana

apoplast pattern‑triggered immunity flg22 proteomics exosomes

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