Keywords: paralog processing, groundnut, gene duplication

Latest 9 Papers

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

The Evolution and Developmental Expression Profile of the PIN-FORMED Family in Setaria viridis

Authors: Fernandes-Esteves, J. M., Travassos-Lins, J., Gomes, J. D. F., Alves-Ferreira, M.

Date: 2025-10-07 · Version: 1

DOI: 10.1101/2025.10.07.680985

Model Organism: Setaria viridis

auxin transport PIN-FORMED genes Setaria viridis C4 monocots gene duplication

Expansion of the DFR Gene Family in Fagopyrum

Authors: Samsolnizam, S., Pucker, B.

Date: 2025-09-21 · Version: 1

DOI: 10.1101/2025.09.20.677491

Model Organism: Fagopyrum

gene duplication dihydroflavonol-4-reductase flavonoid biosynthesis synteny analysis selective pressure

Divergence of Bowman-Birk Protease Inhibitor Family into seed-specific and environmentally responsive subfamilies in Legume and Soybean: Implication for Legume Seed Composition Improvement.

Authors: Wang, Z., Jiang, H., Liu, K., Lohani, N., Misra, S., Gomez-Luciano, L., Pokhrel, S., Collier, R., Kaeppler, S. M., An, Y.-q. C.

Date: 2025-08-27 · Version: 1

DOI: 10.1101/2025.08.26.658694

Model Organism: Glycine max

Bowman-Birk inhibitors soybean gene duplication CRISPR/Cas9 knockout antinutrient reduction

Whole genome sequencing-based multi-locus association mapping for kernel iron, zinc and protein content in groundnut

Authors: Sagar, U. N., Parmar, S., Gangurde, S. S., Sharma, V., Pandey, A. K., Mohinuddin, D. K., Dube, N., Bhat, R. S., John, K., Sreevalli, M. D., Rani, P. S., Singh, K., Varshney, R. K., Pandey, M. K.

Date: 2025-08-05 · Version: 1

DOI: 10.1101/2025.08.04.668427

Model Organism: Arachis hypogaea

groundnut nutritional quality GWAS SNP markers KASP

A conserved small RNA-generating gene cluster undergoes sequence diversification and contributes to plant immunity

Authors: Feng, L., Hou, Y., Toghani, A., Wang, Z., Tang, B., Atkinson, N., Li, H., Qiao, Y., Wang, Y., Hua, J., Zhai, J., Ma, W.

Date: 2025-07-21 · Version: 1

DOI: 10.1101/2025.07.20.665670

Model Organism: Arabidopsis thaliana

secondary siRNA pentatricopete repeat proteins plant immunity gene duplication co‑evolutionary arms race

Meltome Atlas of Arabidopsis thaliana Proteome: A Melting Temperature-Based Identification of Heat & Cold Resistant Proteins

Authors: Mohanta, T. K., Mohanta, K. M.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.22.639691

Model Organism: Arabidopsis thaliana

thermal stability melting temperature (Tm)Arabidopsis thaliana proteome codon usage gene duplication

Genomic insights into the adaptive evolution of the memorial rose (Rosa lucieae; Rosaceae) in saline environments

Authors: Jeon, J.-H., Jung, M., Shin, Y., Kim, S.-C.

Date: 2025-02-23 · Version: 2

DOI: 10.1101/2024.08.29.610403

Model Organism: Rosa lucieae

Rosa lucieae chromosome-level genome assembly salt tolerance gene duplication stress‑response gene families

Duplications in the Chlorophyll a oxygenase (CAO) gene across the Viridiplantae

Authors: Poirier, M. C., Wright, R., Cvetkovska, M.

Date: 2025-02-11 · Version: 1

DOI: 10.1101/2025.02.10.637544

Model Organism: Multi-species

chlorophyll b biosynthesis chlorophyllide a oxygenase (CAO)gene duplication degron sequence comparative genomics