Keywords: paralog processing, high-density SNP array, comparative transcriptomics, SWI3, wheat

Latest 28 Papers

Regenerative agriculture effects on biomass, drought resilience and 14C-photosynthate allocation in wheat drilled into ley compared to disc or ploughed arable soil

Authors: Austen, N., Short, E., Tille, S., Johnson, I., Summers, R., Cameron, D. D., Leake, J. R.

Date: 2025-09-07 · Version: 1

DOI: 10.1101/2025.09.04.674292

regenerative agriculture soil macroaggregation wheat 14C pulse labeling drought resilience

An Axiom SNP genotyping array for potato: development, evaluation and applications

Authors: Baig, N., Thelen, K., Ayenan, M. A. T., Hartje, S., Obeng-Hinneh, E., Zgadzaj, R., Renner, J., Muders, K., Truberg, B., Rosen, A., Prigge, V., Bruckmueller, J., Luebeck, J., Van Inghelandt, D., Stich, B.

Date: 2025-08-20 · Version: 1

DOI: 10.1101/2025.08.17.670748

Model Organism: Solanum tuberosum

high-density SNP array potato (Solanum tuberosum)genomic-assisted breeding GWAS polyphenol oxidase activity

Soil phosphate availability modulates the arbuscular mycorrhizal fungal community and mycorrhizal nutrition in wheat

Authors: Trinquier, M., Lecloux, E., Bruno, P., Gasciolli, V., Jouany, C., Roux, C., Lefebvre, B., Ardanuy, A.

Date: 2025-08-09 · Version: 1

DOI: 10.1101/2025.08.08.669323

Model Organism: Triticum aestivum

arbuscular mycorrhizal fungi phosphorus availability nitrogen availability wheat metabarcoding

An aphid resistant wheat variety reduces the transmission of Barley Yellow Dwarf Virus (BYDV) by Rhopalosiphum padi (L.)

Authors: Qonaah, I. A., Simon, A. L., Warner, D., Bruce, T. J. A., Ray, R. V.

Date: 2025-08-02 · Version: 1

DOI: 10.1101/2025.07.30.667415

Model Organism: Triticum aestivum

aphid resistance Barley Yellow Dwarf Virus wheat 2‑tridecanone virus transmission

Homoeolog expression in polyploid wheat mutants shows limited transcriptional compensation

Authors: Dorussen, D., Knight, E., Simmonds, J., Borrill, P.

Date: 2025-07-02 · Version: 1

DOI: 10.1101/2025.07.01.662569

Model Organism: Triticum aestivum

transcriptional compensation homoeologs premature termination codon wheat mutagenised lines

TaPGS1 Driven Flavonol Accumulation Delays Endosperm Cellularization and Enlarges Wheat Grains

Authors: Wang, J., Guo, X., Liu, X., Jin, Y., zhao, s., Liang, W., Li, M., Cheng, M., Dong, H., Chen, Q., Chen, Z.

Date: 2025-06-23 · Version: 1

DOI: 10.1101/2025.06.17.660139

Model Organism: Triticum aestivum

flavonols grain size TaPGS1 auxin transport wheat

Alginate Oligosaccharides (from DP2 to DP9) Differentially Modulate Phytohormone Levels in Botrytis cinerea-Infected Wheat

Authors: Zhang, Z., Wang, X., Chi, Y.

Date: 2025-06-20 · Version: 1

DOI: 10.1101/2025.06.18.660292

Model Organism: Triticum aestivum

alginate oligosaccharides degree of polymerization phytohormone modulation wheat Botrytis cinerea

2-Oxoglutarate-dependent dioxygenases contribute to cardenolide biosynthesis in Erysimum cheiranthoides (wormseed wallflower)

Authors: Younkin, G., Holland, C. K., Jander, G.

Date: 2025-04-16 · Version: 1

DOI: 10.1101/2025.04.10.648230

Model Organism: Erysimum cheiranthoides

cardenolide biosynthesis 2‑oxoglutarate‑dependent dioxygenases hydroxylation comparative transcriptomics enzyme modeling

Comparative transcriptomics uncovers plant and fungal genetic determinants of mycorrhizal compatibility

Authors: Marques-Galvez, J. E., de Freitas Pereira, M., Nehls, U., Ruytinx, J., Barry, K., Peter, M., Martin, F., Grigoriev, I. V., Veneault-Fourrey, C., Kohler, A.

Date: 2025-04-14 · Version: 1

DOI: 10.1101/2025.04.11.648352

Model Organism: Populus

ectomycorrhizal symbiosis poplar comparative transcriptomics gene regulons compatibility

High radiosensitivity in the conifer Norway spruce (Picea abies) due to lesscomprehensive mobilisation of protection and repair responses compared to the radiotolerant Arabidopsis thaliana

Authors: Bhattacharjee, P., Blagojevic, D., Lee, Y., Gillard, G. B., Gronvold, L., Hvidsten, T. R., Sandve, S. R., Lind, O. C., Salbu, B., Brede, D. A., Olsen, J. E.

Date: 2025-04-14 · Version: 3

DOI: 10.1101/2023.11.20.562501

Model Organism: Multi-species

ionising radiation radiosensitivity comparative transcriptomics DNA damage repair antioxidant response

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