Keywords: paralog processing, leaf development, CLPC2, transcriptome analysis, ascorbate, gene regulatory networks

Latest 14 Papers

CLPC2 plays specific roles in CLP complex-mediated regulation of growth, photosynthesis, embryogenesis and response to growth-promoting microbial compounds

Authors: Leal-Lopez, J., Bahaji, A., De Diego, N., Tarkowski, P., Baroja-Fernandez, E., Munoz, F. J., Almagro, G., Perez, C. E., Bastidas-Parrado, L. A., Loperfido, D., Caporalli, E., Ezquer, I., Lopez-Serrano, L., Ferez-Gomez, A., Coca-Ruiz, V., Pulido, P., Morcillo, R. J. L., Pozueta-Romero, J.

Date: 2025-11-28 · Version: 1

DOI: 10.1101/2025.11.25.690394

Model Organism: Arabidopsis thaliana

CLPC2 microbial volatile compounds chloroplast CLP protease proteomics Arabidopsis thaliana

Transcriptome and hormone regulations shape drought stress-dependent Fusarium Head Blight susceptibility in different barley genotypes

Authors: Hoheneder, F., Steidele, C. E., Gigl, M., Dawid, C., Hueckelhoven, R.

Date: 2025-11-25 · Version: 1

DOI: 10.1101/2025.11.23.689882

Model Organism: Hordeum vulgare

Fusarium Head Blight drought stress barley hormone profiling transcriptome analysis

Aggressive nitrogen assimilation during exponential growth in Chlamydomonas reinhardtii

Authors: Tibule, M., Mallawarachchi, W., Oyateru, O., Ziaeian, M., Kim, M., Dharmasiri, H. N., Lee, J.-H.

Date: 2025-11-04 · Version: 1

DOI: 10.1101/2025.11.02.686124

Model Organism: Chlamydomonas reinhardtii

nitrogen use strategies Chlamydomonas reinhardtii nitrogen assimilation transcriptome analysis nitrogen storage

Maternal Light and Temperature Modulate Seed Longevity in Arabidopsis

Authors: Mazhari Azad, S., Gill Villar, D., Yordan, E., Mestre Pluvinet, P., Forment, J., Tarraga Herrero, S., Gonzalez, C., Ninoles Rodenes, R., Gadea, J.

Date: 2025-10-19 · Version: 1

DOI: 10.1101/2025.10.19.683148

Model Organism: Arabidopsis thaliana

seed longevity maternal environment effect Arabidopsis thaliana temperature and light interaction transcriptome analysis

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Integrative comparative transcriptomics using cultivated and wild rice reveals key regulators of developmental and photosynthetic progression along the rice leaf developmental gradient

Authors: Jathar, V., Vivek, A., Panda, M. K., Daware, A. V., Dwivedi, A., Rani, R., Kumar, S., Ranjan, A.

Date: 2025-08-09 · Version: 1

DOI: 10.1101/2025.08.07.669153

Model Organism: Oryza sativa

leaf development gene regulatory networks photosynthesis rice (Oryza)transcription factors

An evolutionary leap in plant reproduction: From archegonia and motile sperm to embryo sacs and pollen tubes

Authors: Chen, D., Tang, L., Wang, F., Zhang, M., Zheng, S., Xia, M., Wu, Q., Cao, M., Jia, P., Guo, Y., Chen, F., Peng, X., Hu, J., Sun, M., Li, H., Zhang, L., Yang, W.

Date: 2025-08-06 · Version: 1

DOI: 10.1101/2025.08.04.668594

Model Organism: Ginkgo biloba

Ginkgo biloba reproductive transition transcriptome analysis pollen tube guidance MYB98-CRP-ECS module

Physiological characterization in a somaclonal mutant for fruit shape derived from persimmon 'Hiratanenashi'

Authors: Horiuchi, A., Matsuzaki, R., Onoue, N., Ushijima, K., Kubo, Y., Akagi, T., Minamikawa, M. F.

Date: 2025-05-19 · Version: 1

DOI: 10.1101/2025.05.19.654774

Model Organism: Diospyros kaki

fruit shape persimmon (Diospyros kaki)elliptic Fourier descriptor transcriptome analysis WOX13

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

High-resolution transcriptional atlas of growing maize shoot organs throughout plant development under well-watered and drought conditions

Authors: Zhang, J., Verbraeken, L., Sprenger, H., Mertens, S., Wuyts, N., Cannoot, B., De Block, J., Demuynck, K., Natran, A., Maleux, K., Merchie, J., Crafts-Brandner, S., Vogel, J., Bruce, W., Inze, D., Maere, S., Nelissen, H.

Date: 2025-03-13 · Version: 1

DOI: 10.1101/2025.03.12.642568

Model Organism: Zea mays

Zea mays leaf and internode development drought stress spatiotemporal transcriptome atlas gene regulatory networks

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