Keywords: paralog processing, root development, transcriptome, climate adaptation

Latest 15 Papers

Evolutionary genomics of local adaptation, climate vulnerability, and linarin metabolism in Opisthopappus longilobus

Authors: Jing, R., Su, J., Song, A., Chen, W., Wang, M., Xue, J., Zhang, Y., Su, X., Wang, Y., Yu, Z., He, J., Ma, L., Zhang, F., Wang, H., Wang, Z., Chen, S., Fang, W., Jiang, J., Chen, F.

Date: 2026-01-22 · Version: 1

DOI: 10.64898/2026.01.20.700049

Model Organism: Opisthopappus longilobus

Opisthopappus chromosome-scale genome assembly population genomics climate adaptation genomic offset

Root-Suppressed Phenotype of Tomato Rs Mutant is Seemingly Related to Expression of Root-Meristem-Specific Sulfotransferases

Authors: Kumari, A., Gupta, P., Santisree, P., Pamei, I., Valluri,, S., Sharma, K., Venkateswara Rao, K., Shukla, S., Nama, S., Sreelakshmi, Y., Sharma, R.

Date: 2026-01-03 · Version: 1

DOI: 10.64898/2026.01.03.697460

Model Organism: Solanum lycopersicum

root development sulfur metabolism sulfotransferase radiation‑induced mutant tomato

Night temperature determines nearly half of wheat yield variation globally

Authors: Schulthess, U., Reynolds, M. P., Atkin, O., Giron, E., Asseng, S., Snapp, S.

Date: 2026-01-02 · Version: 1

DOI: 10.64898/2025.12.19.695361

Model Organism: Triticum aestivum

daily minimum temperature grain filling spring wheat yield nighttime respiration climate adaptation

An ancient alkalinization factor informs Arabidopsis root development

Authors: Xhelilaj, K., von Arx, M., Biermann, D., Parvanov, A., Faiss, N., Monte, I., Klingelhuber, F., Zipfel, C., Timmermans, M., Oecking, C., Gronnier, J.

Date: 2025-12-23 · Version: 1

DOI: 10.64898/2025.12.22.695669

Model Organism: Arabidopsis thaliana

REMORIN proteins H⁺‑ATPase inhibition extracellular pH (pHe) alkalinization root development Arabidopsis thaliana

A non-coding SNP in ELF3 alters expression of ELF3β and confers adaptation of Arabidopsis to a continental climate

Authors: Buckley, C. R., Fournier-Level, A., Haydon, M. J.

Date: 2025-10-24 · Version: 1

DOI: 10.1101/2025.10.23.684042

Model Organism: Arabidopsis thaliana

circadian clock EARLY FLOWERING 3 (ELF3)Arabidopsis natural variation genome-wide association study climate adaptation

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Unlocking Genetic Diversity in Colombian Cassava Landraces for Accelerated Breeding

Authors: Zhao, K., Long, E., Sanchez, F., Chavarriaga, P., Monroe, J. G.

Date: 2025-07-01 · Version: 1

DOI: 10.1101/2025.06.30.662420

Model Organism: Manihot esculenta

cassava genomic diversity landrace varieties loss-of-function mutations gene editing targets climate adaptation

Tomato leaf transcriptomic changes promoted by long-term water scarcity stress can be largely prevented by a fungal-based biostimulant

Authors: Lopez-Serrano, L., Ferez-Gomez, A., Romero-Aranda, R., Jaime Fernandez, E., Leal Lopez, J., Fernandez Baroja, E., Almagro, G., Dolezal, K., Novak, O., Diaz, L., Bautista, R., Leon Morcillo, R. J., Pozueta Romero, J.

Date: 2025-06-28 · Version: 1

DOI: 10.1101/2025.06.26.661737

Model Organism: Solanum lycopersicum

water deficit Trichoderma harzianum culture filtrate tomato drought tolerance transcriptome

Ethylene Receptor Gain- and Loss-of-function Mutants Reveal an ETR1-dependent Transcriptional Network in Roots

Authors: White, M. G., Harkey, A., Muhlemann, J. K., Olex, A. L., Pfeffer, N. J., Houben, M., Binder, B., Muday, G. K.

Date: 2025-06-22 · Version: 3

DOI: 10.1101/2024.06.26.600793

Model Organism: Arabidopsis thaliana

ethylene signaling ETR1 root development gene regulatory network Arabidopsis

Leaf shape modulates climate trait relationships in the wild species Chenopodium hircinum (Amaranthaceae)

Authors: Rodriguez, J., Quipildor, V., Giamminola, E., Bramardi, S., Jarvis, D., Maughan, J., Xu, J., Farooq, H., Ortega-Baes, P., Jellen, E., Tester, M., Bertero, D., Curti, R. N.

Date: 2025-04-22 · Version: 1

DOI: 10.1101/2025.04.21.649804

Model Organism: Chenopodium hircinum

leaf morphology phenotypic plasticity functional traits morphometric analysis climate adaptation

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