Keywords: paralog processing, spatial transcriptomics, transcriptome, Arabidopsis thaliana

Latest 254 Papers

MIR319C activation by CUP-SHAPED COTYLEDON2 delays cell proliferation-to-differentiation transition in Arabidopsis leaf primordia

Authors: Alanga, N. S., Gupta, A., Mane, V., Roy, S., Jayanarayan Perumadaraya, A., V, A., Hamant, O., Nath, U.

Date: 2025-07-01 · Version: 2

DOI: 10.1101/2024.09.07.611804

miR319 CUC2 transcription factor leaf size regulation JAW‑TCP Arabidopsis thaliana

Tomato leaf transcriptomic changes promoted by long-term water scarcity stress can be largely prevented by a fungal-based biostimulant

Authors: Lopez-Serrano, L., Ferez-Gomez, A., Romero-Aranda, R., Jaime Fernandez, E., Leal Lopez, J., Fernandez Baroja, E., Almagro, G., Dolezal, K., Novak, O., Diaz, L., Bautista, R., Leon Morcillo, R. J., Pozueta Romero, J.

Date: 2025-06-28 · Version: 1

DOI: 10.1101/2025.06.26.661737

Model Organism: Solanum lycopersicum

water deficit Trichoderma harzianum culture filtrate tomato drought tolerance transcriptome

Papaver S-determinants trigger an integrated network of mitochondrially derived ROS and disruption of energy metabolism in incompatible pollen tubes

Authors: Wang, L., Hsiao, A.-S., Carli, J., Raza, A., Lin, Z., Arnaud, D., Davies, J., Franklin-Tong, V. E., Smirnoff, N., Bosch, M.

Date: 2025-06-27 · Version: 1

DOI: 10.1101/2025.06.26.661469

Model Organism: Arabidopsis thaliana

self-incompatibility reactive oxygen species mitochondrial disruption Ca2+ signaling Arabidopsis thaliana

Translational landscape during Seed Germination at Sub-Codon resolution

Authors: Bai, B., Qi, r., Song, W., Nijveen, H., Bentsink, L.

Date: 2025-06-27 · Version: 1

DOI: 10.1101/2025.06.24.661055

Model Organism: Arabidopsis thaliana

seed germination translational regulation ribosome profiling Arabidopsis thaliana upstream open reading frames

A desert endophyte, Priestia megaterium SI1-IITJ, improves fluoride stress tolerance by reducing fluoride content of plant tissues and perturbing salt tolerance and defense genes of Arabidopsis thaliana

Authors: Verma, D., Sharma, P., Kumar, R., Jangir, N., Prajapat, V., Marik, D., Mandi, R., Raychoudhury, T., Chauhan, N. S., SADHUKHAN, A.

Date: 2025-06-24 · Version: 1

DOI: 10.1101/2025.06.20.660123

Model Organism: Arabidopsis thaliana

fluoride resistance endophytic bacterium plant growth‑promoting rhizobacteria Priestia megaterium Arabidopsis thaliana

Clade V MLO proteins are bona fide host susceptibility factors required for powdery mildew pathogenesis in Arabidopsis

Authors: Bloodgood, D., Zhang, Q., Li, P., Wu, Y., Pan, M., Zhou, C., Hsu, A., Zhang, J., Panstrgua, R., Kessler, S., He, P., Shan, L., Wei, C.-I., Xiao, S.

Date: 2025-06-23 · Version: 1

DOI: 10.1101/2025.06.18.660284

Model Organism: Arabidopsis thaliana

powdery mildew MLO2 Arabidopsis thaliana host susceptibility genetic screen

Multi-Omics Analysis of Heat Stress-Induced Memory in Arabidopsis

Authors: Thirumlaikumar, V. P. P., Yu, L., Arora, D., Mubeen, U., Wisniewski, A., Walther, D., Giavalisco, P., Alseekh, S., DL Nelson, A., Skirycz, A., Balazadeh, S.

Date: 2025-06-23 · Version: 1

DOI: 10.1101/2025.06.19.660594

Model Organism: Arabidopsis thaliana

heat stress acquired thermotolerance heat stress memory multi-omics Arabidopsis thaliana

Molecular Insights into the Production of Extracellular Vesicles by Plants

Authors: Koch, B. L., Gardner, D., Smith, H., Bracewell, R., Awdey, L., Foster, J., Borniego, M. L., Munch, D. H., Nielsen, M. E., Pasupuleti, R., Trinidad, J., Rutter, B., Thordal-Christensen, H., Innes, R. W.

Date: 2025-06-17 · Version: 1

DOI: 10.1101/2025.06.16.659989

Model Organism: Arabidopsis thaliana

extracellular vesicles Arabidopsis thaliana EXO70 exocyst complex proximity labeling plant immunity

The Ca2+ Channel CYCLIC NUCLEOTIDE GATED CHANNEL13 (CNGC13) regulates systemic wound signalling and immunity against Spodoptera herbivory

Authors: Prajapati, R., Kumari, M., Singh, Y., Pawar, M., Marchesano, B. M. O., Kalia, J., Costa, A., Vadassery, J.

Date: 2025-06-17 · Version: 1

DOI: 10.1101/2025.06.16.660006

Model Organism: Arabidopsis thaliana

CNGC13 systemic Ca2+ signaling jasmonate defense glucosinolate metabolism Arabidopsis thaliana

Analysis of protein aging reveals rates of subcellular organelle renewal and selective post-translational modification in Arabidopsis

Authors: Tivendale, N., Liu, X., Millar, A. H.

Date: 2025-06-12 · Version: 1

DOI: 10.1101/2025.06.09.658759

Model Organism: Arabidopsis thaliana

protein aging pulse‑chase BONCAT Arabidopsis thaliana mass spectrometry proteomics oxidative post‑translational modifications

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