Keywords: paralog processing, transcriptome, metabarcoding, deep learning, transcriptomics, Arabidopsis thaliana

Latest 287 Papers

Production of homozygous deletion mutants targeting fertilization regulator genes through multiplex genome editing

Authors: Yoshimura, A., Seo, Y., Kobayashi, S., Igawa, T.

Date: 2025-03-06 · Version: 1

DOI: 10.1101/2025.02.28.640930

Model Organism: Arabidopsis thaliana

CRISPR/Cas9 multiplex guide RNAs gene knockout Arabidopsis thaliana fertilization regulators

Sensitive detection of chloroplast movements through changes in leaf cross-polarized reflectance

Authors: Hermanowicz, P., Giza, A., Sowa, K., Korecki, P., Labuz, J.

Date: 2025-03-03 · Version: 2

DOI: 10.1101/2023.10.24.563792

Model Organism: Arabidopsis thaliana

chloroplast movements cross-polarized reflectance Arabidopsis thaliana blue‑light induced relocation non‑contact detection

MYB59 is linked to natural variation of water use associated with warmer temperatures in Arabidopsis thaliana

Authors: Ferguson, J. N., Brendel, O., Bechtold, U.

Date: 2025-02-28 · Version: 1

DOI: 10.1101/2025.02.27.640580

Model Organism: Arabidopsis thaliana

water-use variation Arabidopsis thaliana climate adaptation GWAS MYB59

The ribosomal protein RPS6A modulates auxin signalling and root development in Arabidopsis

Authors: Pan, K., Hou, K., Kong, M., Tan, S.

Date: 2025-02-28 · Version: 1

DOI: 10.1101/2025.02.26.640312

Model Organism: Arabidopsis thaliana

RPS6A auxin signaling Arabidopsis thaliana root development PIN transporters

Aphid effector Mp10 balances immune suppression and defence activation through EDS1-dependent modulation of plant DAMP responses

Authors: Gravino, M., Mugford, S. T., Pontiggia, D., Joyce, J., Drurey, C., Prince, D. C., Cervone, F., De Lorenzo, G., Hogenhout, S. A.

Date: 2025-02-28 · Version: 1

DOI: 10.1101/2025.02.26.640334

Model Organism: Arabidopsis thaliana

DAMP‑triggered immunity oligogalacturonides aphid effector Mp10 Arabidopsis thaliana EDS1 signaling

Fiber Bragg grating based sensing system for non-destructive root phenotyping using ResNet prediction

Authors: Binder, S., Hossain, K., Bucksch, A., Fok, M.

Date: 2025-02-28 · Version: 2

DOI: 10.1101/2024.09.17.613457

Model Organism: Zea mays

root architecture fiber Bragg grating real-time phenotyping deep learning Zea mays

A TNL receptor mediates microbiome feedbacks in Arabidopsis

Authors: Janse van Rensburg, H., Schandry, N., Waelchli, J., Stengele, K., Cadot, S., Jandrasits, K., Becker, C., Schlaeppi, K.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.25.640125

Model Organism: Arabidopsis thaliana

soil microbiome Arabidopsis thaliana growth feedback immune receptor MMF1 genome-wide association study

The genetic basis for synchronized time perception in plant populations

Authors: Lock, S. C. L., McCarthy, K., Ronald, J., Anwer, M. U., Davis, A., Hallstein, M., Redmond, E. J., Knight, M., Davis, S., Ezer, D.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.25.640030

Model Organism: Arabidopsis thaliana

circadian rhythms photoperiod quantitative trait loci KH-domain RNA binding proteins Arabidopsis thaliana

Triphenylphosphonium is an effective targeting moiety for plants mitochondria

Authors: Lazary, S., Mamam, G., Binenbaum, J., Ronen, M. M., Tal, I., Yariv, E., Shani, E., Weinstain, R.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.20.638842

Model Organism: Arabidopsis thaliana

mitochondrial targeting triphenylphosphonium (TPP)Arabidopsis thaliana ciprofloxacin conjugate retrograde signaling

Stress drives plasticity in leaf maturation transcriptional dynamics

Authors: Swift, J., Wu, X., Xu, J., Jain, T., Illouz-Eliaz, N., Nery, J. R., Chory, J., Ecker, J. R.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.24.639183

Model Organism: Arabidopsis thaliana

leaf development drought stress single-nucleus transcriptomics Arabidopsis thaliana cell-type specific gene upregulation

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