Keywords: paralog processing, transcriptome, metabolic engineering

Latest 7 Papers

Branch-Enabling N-Methyltransferase in Golgi Reconciles Divergent Models of Galanthamine Biosynthesis

Authors: Lamichhane, B., Niraula, A., Merindol, N., Gelinas, S.-E., Ricard, S., Lague, P., Germain, H., Desgagne-Penix, I.

Date: 2025-12-23 · Version: 1

DOI: 10.64898/2025.12.20.695673

Model Organism: Leucojum aestivum

galanthamine biosynthesis N-methyltransferase Leucojum aestivum Golgi localization metabolic engineering

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Introducing furanocoumarin biosynthetic genes in tomato results in coumarins accumulation and impacted growth

Authors: Bouille, A., Villard, C., Galati, G., Roumani, M., Fauvet, A., Grosjean, J., Hoengenaert, L., Boerjan, W., Ralph, J., Hilliou, F., Robin, C., Hehn, A., Larbat, R.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.07.663522

Model Organism: Solanum lycopersicum

metabolic engineering linear furanocoumarin pathway coumarins tomato metabolomics

Tomato leaf transcriptomic changes promoted by long-term water scarcity stress can be largely prevented by a fungal-based biostimulant

Authors: Lopez-Serrano, L., Ferez-Gomez, A., Romero-Aranda, R., Jaime Fernandez, E., Leal Lopez, J., Fernandez Baroja, E., Almagro, G., Dolezal, K., Novak, O., Diaz, L., Bautista, R., Leon Morcillo, R. J., Pozueta Romero, J.

Date: 2025-06-28 · Version: 1

DOI: 10.1101/2025.06.26.661737

Model Organism: Solanum lycopersicum

water deficit Trichoderma harzianum culture filtrate tomato drought tolerance transcriptome

Discovery of iridoid cyclase completes the iridoid pathway in asterids

Authors: Colinas, M., Tymen, C., Wood, J. C., David, A., Wurlitzer, J., Morweiser, C., Gase, K., Alam, R. M., Titchiner, G. R., Hamilton, J. P., Heinicke, S., Dirks, R. P., Lopes, A. A., Caputi, L., Buell, C. R., O'Connor, S. E.

Date: 2025-06-17 · Version: 1

DOI: 10.1101/2025.06.12.659277

Model Organism: Multi-species

iridoid cyclase asterid plants iridoid biosynthesis enzyme-catalyzed cyclization metabolic engineering

Metabolically engineered plant cell cultures as biofactories for the production of high-value carotenoid pigments astaxanthin and canthaxanthin

Authors: Rebelo, B. A., Ventura, M. R., Abranches, R.

Date: 2025-03-19 · Version: 1

DOI: 10.1101/2025.03.18.643922

Model Organism: Nicotiana tabacum

ketocarotenoids astaxanthin canthaxanthin metabolic engineering tobacco BY-2 cell cultures

Transcriptome responses of two Halophila stipulacea seagrass populations from pristine and impacted habitats, to single and combined thermal and excess nutrient stressors, reveal local adaptive features and core stress-response genes

Authors: Nguyen, H. M., Yaakov, B., Beca-Carretero, P., Procaccini, G., Wang, G., Dassanayake, M., Winters, G., Barak, S.

Date: 2025-01-27 · Version: 2

DOI: 10.1101/2025.01.21.634158

Model Organism: Halophila stipulacea

Halophila stipulacea thermal stress nutrient stress combined stressors transcriptome