Keywords: paralog processing, transcriptome analysis, alternative splicing, temperature stress

Latest 26 Papers

An elevated environmental temperature impairs accumulation of the pattern recognition receptor FLS2

Authors: Jacobs, B. C. I. C., Knight, M. R., Bender, K. W., Six, E., Zipfel, C.

Date: 2025-10-20 · Version: 1

DOI: 10.1101/2025.10.20.683271

Model Organism: Arabidopsis thaliana

Pattern‑triggered immunity FLS2 membrane fluidity temperature stress calcium signalling

Impact of alternative splicing on Arabidopsis proteome

Authors: Reyes, A. V., Zhang, C., Karunadasa, S. S., Shrestha, R., Grismer, T. S., Byun, D., Xu, S.

Date: 2025-10-20 · Version: 3

DOI: 10.1101/2024.02.29.582853

Model Organism: Arabidopsis thaliana

alternative splicing isoform-specific peptides intron retention proteogenomics Arabidopsis thaliana

Maternal Light and Temperature Modulate Seed Longevity in Arabidopsis

Authors: Mazhari Azad, S., Gill Villar, D., Yordan, E., Mestre Pluvinet, P., Forment, J., Tarraga Herrero, S., Gonzalez, C., Ninoles Rodenes, R., Gadea, J.

Date: 2025-10-19 · Version: 1

DOI: 10.1101/2025.10.19.683148

Model Organism: Arabidopsis thaliana

seed longevity maternal environment effect Arabidopsis thaliana temperature and light interaction transcriptome analysis

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Simulating the Impacts of Climate Change on UH Manoa Lettuce (Lactuca sativa) Growth by Modifying Air Temperature, Soil Water Availability, and Atmospheric CO2 Concentration

Authors: Yos, N., Mora, C., Webster, K., McDowell, K.

Date: 2025-08-18 · Version: 1

DOI: 10.1101/2025.08.13.670242

Model Organism: Lactuca sativa

climate change CO₂ concentration temperature stress water availability Lactuca sativa

An evolutionary leap in plant reproduction: From archegonia and motile sperm to embryo sacs and pollen tubes

Authors: Chen, D., Tang, L., Wang, F., Zhang, M., Zheng, S., Xia, M., Wu, Q., Cao, M., Jia, P., Guo, Y., Chen, F., Peng, X., Hu, J., Sun, M., Li, H., Zhang, L., Yang, W.

Date: 2025-08-06 · Version: 1

DOI: 10.1101/2025.08.04.668594

Model Organism: Ginkgo biloba

Ginkgo biloba reproductive transition transcriptome analysis pollen tube guidance MYB98-CRP-ECS module

Molecular characterization of flower bud dormancy under constrained temperatures unveils a shallow dormancy stage induced by cold deprivation

Authors: Fouche, M., Bonnet, H., Prigent, S., Wenden, B.

Date: 2025-07-01 · Version: 1

DOI: 10.1101/2025.06.27.661981

Model Organism: Prunus avium

winter dormancy temperature stress sweet cherry transcriptomics shallow dormancy phase

Characterization of the maize (Zea mays)-Ustilago maydis interaction in a warming climate

Authors: Schwarz, C. G., Hartmann, F., Zier, C., van der Linde, K.

Date: 2025-05-29 · Version: 1

DOI: 10.1101/2025.05.26.656155

Model Organism: Zea mays

Zea mays Ustilago maydis temperature stress RNA-seq GSL4

Physiological characterization in a somaclonal mutant for fruit shape derived from persimmon 'Hiratanenashi'

Authors: Horiuchi, A., Matsuzaki, R., Onoue, N., Ushijima, K., Kubo, Y., Akagi, T., Minamikawa, M. F.

Date: 2025-05-19 · Version: 1

DOI: 10.1101/2025.05.19.654774

Model Organism: Diospyros kaki

fruit shape persimmon (Diospyros kaki)elliptic Fourier descriptor transcriptome analysis WOX13

A network of RS splicing regulatory proteins controls light-dependent splicing and seedling development

Authors: Saile, J., Walter, H., Denecke, M., Lederer, P., Schuetz, L., Hiltbrunner, A., Lepp, K., Lobato-Gil, S., Beli, P., Wachter, A.

Date: 2025-04-08 · Version: 1

DOI: 10.1101/2025.04.07.646831

Model Organism: Arabidopsis thaliana

photomorphogenesis alternative splicing phospho-proteomics RS (SR) proteins Arabidopsis thaliana

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