Keywords: paralog processing, transcriptome reprogramming, ascorbate, host specificity

Latest 8 Papers

Methionine Triggers Metabolic, Transcriptional, and Epigenetic Reprogramming in Arabidopsis Leaves

Authors: Yerushalmy, Y., Dafni, M., Rabach, N., Hacham, Y., Amir, R.

Date: 2025-11-03 · Version: 1

DOI: 10.1101/2025.11.02.686087

methionine metabolism Arabidopsis thaliana DNA methylation transcriptome reprogramming stress hormone pathways

Pan-genome analyses of 226 finger millet-infecting Magnaporthe oryzae strains from eastern Africa reveal two lineages that differ in their genetic make-up, virulence and effector gene content with gene loss driven by homologous recombination between Pot2 elements

Authors: Devos, K. M., Qi, P., Mangum, B., Grimwood, J., Jenkins, J. W., Atemia, J., Shittu, T., Zhu, J., Bahri, B., Wright, H., Prado, K., Sahin, Y., Wang, H., Kim, D. W., Muthumeenakshi, S., Pendergast, T., Dida, M., Ringo, J., Takan, J., Tesfaye, K., Sreenivasaprasad, S., Kim, K.-t., Lee, Y.-H., de Villiers, S., Khang, C. H., Alemu, T.

Date: 2025-10-15 · Version: 1

DOI: 10.1101/2025.10.14.682320

Model Organism: Eleusine coracana (finger millet)

Magnaporthe oryzae finger millet blast effector gene repertoire population genomics host specificity

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

The host range paradox of Meloidogyne incognita: a physiological and transcriptomic analysis of nine susceptible interactions across six plant orders

Authors: Moura de Souza, V. H., Pellegrin, C., Hanlon, V. C. T., Xia, C., Kranse, O. P., Sonawala, U., Desikan, P., Senatori, B., Danchin, E. G. J., Derevnina, L., Eves-van den Akker, S.

Date: 2025-09-29 · Version: 1

DOI: 10.1101/2025.09.26.678250

Model Organism: Multi-species

Meloidogyne incognita host range cross‑kingdom transcriptome effector deployment host specificity

Bioherbicidal activity and host range of Teratoramularia rumicicola strain TR4 isolated from Rumex crispus in Japan

Authors: Izumi, M., Sato, T.

Date: 2025-08-07 · Version: 1

DOI: 10.1101/2025.08.06.668795

Model Organism: Rumex spp.

Rumex weeds Teratoramularia rumicicola bioherbicide host specificity phylogenetic analysis

Analyzing the morphological variation of the Galapagos mistletoePhoradendron berteroanum (Santalaceae) using herbarium specimens

Authors: Puentes-Marin, J., Denison, A., Villalba-Aleman, J., Mazon-Redin, J., Pinto, M.

Date: 2025-05-19 · Version: 1

DOI: 10.1101/2025.05.16.654492

Model Organism: Phoradendron berteroanum

Phoradendron berteroanum morphological variation altitudinal gradient host specificity Galapagos islands

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

SnRK1.1 Coordinates Organ-Specific Growth-Defense Programs via Transcriptomic Rewiring in Arabidopsis thaliana

Authors: Kalachova, T., Muller, K., Lacek, J., Pree, S., Antonova, A., Bondarenko, O., Burketova, L., Retzer, K., Weckwerth, W.

Date: 2025-04-29 · Version: 1

DOI: 10.1101/2025.04.25.650715

Model Organism: Arabidopsis thaliana

SnRK1 KIN10 transcriptome reprogramming plant immunity tissue-specific signaling