Keywords: paralog processing, transcriptome reprogramming, introgression, Enterobacter sp. SA187

Latest 7 Papers

Methionine Triggers Metabolic, Transcriptional, and Epigenetic Reprogramming in Arabidopsis Leaves

Authors: Yerushalmy, Y., Dafni, M., Rabach, N., Hacham, Y., Amir, R.

Date: 2025-11-03 · Version: 1

DOI: 10.1101/2025.11.02.686087

Model Organism: Arabidopsis thaliana

methionine metabolism Arabidopsis thaliana DNA methylation transcriptome reprogramming stress hormone pathways

Enterobacter sp. SA187-induced coordinated regulation of high-affinity nitrate transporters and ethylene signaling enhances nitrogen content and plant growth under low nitrate

Authors: Ilyas, A., Mauve, C., Decouard, B., Caius, J., Paysant-Leroux, C., Hodges, M., de Zelicourt, A.

Date: 2025-10-26 · Version: 2

DOI: 10.1101/2025.06.23.660384

Model Organism: Arabidopsis thaliana

Enterobacter sp. SA187 low nitrate nutrition ethylene signaling high-affinity nitrate transporters plant‑growth‑promoting bacteria

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Enhancement of Arabidopsis growth by Enterobacter sp. SA187 under elevated CO2 is dependent on ethylene signalling activation and primary metabolism reprogramming

Authors: Ilyas, A., Mauve, C., Pateyron, S., Paysant-Le Roux, C., Bigeard, J., Hodges, M., de Zelicourt, A.

Date: 2025-07-09 · Version: 1

DOI: 10.1101/2025.07.08.663752

Model Organism: Arabidopsis thaliana

Enterobacter sp. SA187 elevated CO2 Arabidopsis thaliana phytohormone signaling transcriptomics

SnRK1.1 Coordinates Organ-Specific Growth-Defense Programs via Transcriptomic Rewiring in Arabidopsis thaliana

Authors: Kalachova, T., Muller, K., Lacek, J., Pree, S., Antonova, A., Bondarenko, O., Burketova, L., Retzer, K., Weckwerth, W.

Date: 2025-04-29 · Version: 1

DOI: 10.1101/2025.04.25.650715

Model Organism: Arabidopsis thaliana

SnRK1 KIN10 transcriptome reprogramming plant immunity tissue-specific signaling

Micro-Mel and Mini-Mel short life cycle dwarf lines with Solanum anguivi introgressions as the first model varieties for eggplant research and breeding

Authors: Martinez-Lopez, M., Baraja-Fonseca, V., Garcia-Fortea, E., Plazas, M., Vilanova, S., Prohens, J., Gramazio, P.

Date: 2025-03-07 · Version: 1

DOI: 10.1101/2025.03.07.642017

Model Organism: Solanum melongena

Solanum melongena dwarf model lines introgression whole‑genome sequencing rapid‑cycling

Population-scale gene expression analysis reveals the contribution of expression diversity to the modern wheat improvement

Authors: Zhang, Z., Ma, S., Yin, M., Zhao, C., Zhao, X., yu, Y., Wang, H., Li, X., Si, Y., Niu, J., Xie, J., Wang, L., Wu, J., Zhang, Y., Zheng, Q., Zheng, S., Jiang, N., Liu, X., Ling, H.-Q., He, F.

Date: 2025-02-23 · Version: 1

DOI: 10.1101/2025.02.18.638840

Model Organism: Triticum aestivum

gene expression variation pan‑genome eQTL analysis introgression wheat