Keywords: paralog processing, transcriptome reprogramming, machine learning, reactive oxygen species

Latest 38 Papers

High Density Phenotypic Map of Natural Variation for Intermediate Phenotypes Associated with Stalk Lodging Resistance in Maize

Authors: Kunduru, B., Bokros, N. T., Tabaracci, K., Kumar, R., Brar, M. S., Stubbs, C. J., Oduntan, Y., DeKold, J., Bishop, R. H., Woomer, J., Verges, V. L., McDonald, A., McMahan, C. S., DeBolt, S., Robertson, D. J., Sekhon, R.

Date: 2025-04-06 · Version: 1

DOI: 10.1101/2025.04.03.647088

Model Organism: Zea mays

stalk lodging resistance maize phenomics genetic architecture intermediate phenotypes machine learning

HISTONE DEACETYLASE COMPLEX 1 modulates sepal length through the ethylene-ROS module

Authors: Xiang, D., Qiu, D., Zhang, R., He, X., Xu, S., Zhou, M., Hong, L.

Date: 2025-03-31 · Version: 1

DOI: 10.1101/2025.03.27.645679

Model Organism: Arabidopsis thaliana

HISTONE DEACETYLASE COMPLEX 1 sepal size regulation ethylene signaling reactive oxygen species Arabidopsis thaliana

Antioxidant properties of dihydroxy B-ring flavonoids modulate circadian amplitude in Arabidopsis

Authors: Littleton, E. S., Hildreth, S. B., Kojima, S., Winkel, B. S. J.

Date: 2025-03-13 · Version: 1

DOI: 10.1101/2025.03.09.641856

Model Organism: Arabidopsis thaliana

flavonoids circadian clock reactive oxygen species TOC1:LUC reporter chloroplast calcium signaling

The hollow truth: ethylene-triggered ROS, PCD, senescence, and autophagy drive hollow stem formation

Authors: Yan, M., Fan, W., Yang, W., Zhao, J., Meng, Y., Zhou, W., Zhuang, H., Xu, Z., Wang, Y., Huang, Q., Yuan, L., Wang, H., Yang, J.

Date: 2025-03-07 · Version: 1

DOI: 10.1101/2025.03.06.641815

Model Organism: Ipomoea aquatica

hollow stem programmed cell death ethylene signaling reactive oxygen species NAC transcription factors

Sunflower yield modeling with XAI: Historical weather impacts and forecasting

Authors: Majumder, S., Mason, C.

Date: 2025-02-28 · Version: 1

DOI: 10.1101/2025.02.27.640573

Model Organism: Helianthus annuus

explainable AI sunflower yield climate variability machine learning Shared Socioeconomic Pathways

Protein and genetic interactions between RACK1A and FSD1 modulate plant development and stress granule-dependent response to salt in Arabidopsis.

Authors: Melicher, P., Dvorak, P., Tsinyk, M., Rehak, J., Samajova, O., Hlavackova, K., Ovecka, M., Samaj, J., Takac, T.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.25.640159

Model Organism: Arabidopsis thaliana

reactive oxygen species salt stress RACK1A-FSD1 interaction stress granules Arabidopsis

Pattern-triggered immunity in blue and white seed cultivars of Papaver somniferum

Authors: Hernandez Orozco, J. S., Iakovenko, O., Zeiner, A., Hronkova, M., Kubasek, J., Kucerova, B., Vachova, I., Pop, S., Marsik, P., Macho, M., Fojtikova, P., Rychla, A., Hejna, O., Kulich, I., Wrzaczek, M., Janda, M.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.23.639761

Model Organism: Papaver somniferum

Pattern‑triggered immunity flg22 reactive oxygen species MAPK phosphorylation Papaver somniferum

Hydrogen Sulfide modulates Flagellin-Induced Stomatal Immunity

Authors: Scuffi, D., Pantaleno, R., Schiel, P., Peer Niemeier, J.-O., Costa, A., Schwarzländer, M., Laxalt, A., Garcia Mata, C.

Date: 2025-02-19 · Version: 1

DOI: 10.1101/2025.02.14.638267

Model Organism: Arabidopsis thaliana

hydrogen sulfide DES1 stomatal immunity flg22 reactive oxygen species

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