Keywords: paralog processing, transcriptome reprogramming, metabolic engineering

Latest 7 Papers

Branch-Enabling N-Methyltransferase in Golgi Reconciles Divergent Models of Galanthamine Biosynthesis

Authors: Lamichhane, B., Niraula, A., Merindol, N., Gelinas, S.-E., Ricard, S., Lague, P., Germain, H., Desgagne-Penix, I.

Date: 2025-12-23 · Version: 1

DOI: 10.64898/2025.12.20.695673

Model Organism: Leucojum aestivum

galanthamine biosynthesis N-methyltransferase Leucojum aestivum Golgi localization metabolic engineering

Methionine Triggers Metabolic, Transcriptional, and Epigenetic Reprogramming in Arabidopsis Leaves

Authors: Yerushalmy, Y., Dafni, M., Rabach, N., Hacham, Y., Amir, R.

Date: 2025-11-03 · Version: 1

DOI: 10.1101/2025.11.02.686087

Model Organism: Arabidopsis thaliana

methionine metabolism Arabidopsis thaliana DNA methylation transcriptome reprogramming stress hormone pathways

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Introducing furanocoumarin biosynthetic genes in tomato results in coumarins accumulation and impacted growth

Authors: Bouille, A., Villard, C., Galati, G., Roumani, M., Fauvet, A., Grosjean, J., Hoengenaert, L., Boerjan, W., Ralph, J., Hilliou, F., Robin, C., Hehn, A., Larbat, R.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.07.663522

Model Organism: Solanum lycopersicum

metabolic engineering linear furanocoumarin pathway coumarins tomato metabolomics

Discovery of iridoid cyclase completes the iridoid pathway in asterids

Authors: Colinas, M., Tymen, C., Wood, J. C., David, A., Wurlitzer, J., Morweiser, C., Gase, K., Alam, R. M., Titchiner, G. R., Hamilton, J. P., Heinicke, S., Dirks, R. P., Lopes, A. A., Caputi, L., Buell, C. R., O'Connor, S. E.

Date: 2025-06-17 · Version: 1

DOI: 10.1101/2025.06.12.659277

Model Organism: Multi-species

iridoid cyclase asterid plants iridoid biosynthesis enzyme-catalyzed cyclization metabolic engineering

SnRK1.1 Coordinates Organ-Specific Growth-Defense Programs via Transcriptomic Rewiring in Arabidopsis thaliana

Authors: Kalachova, T., Muller, K., Lacek, J., Pree, S., Antonova, A., Bondarenko, O., Burketova, L., Retzer, K., Weckwerth, W.

Date: 2025-04-29 · Version: 1

DOI: 10.1101/2025.04.25.650715

Model Organism: Arabidopsis thaliana

SnRK1 KIN10 transcriptome reprogramming plant immunity tissue-specific signaling

Metabolically engineered plant cell cultures as biofactories for the production of high-value carotenoid pigments astaxanthin and canthaxanthin

Authors: Rebelo, B. A., Ventura, M. R., Abranches, R.

Date: 2025-03-19 · Version: 1

DOI: 10.1101/2025.03.18.643922

Model Organism: Nicotiana tabacum

ketocarotenoids astaxanthin canthaxanthin metabolic engineering tobacco BY-2 cell cultures