Keywords: paralog processing, transcriptome reprogramming, transcriptomic analysis, ethylene signaling

Latest 24 Papers

Gain and loss of gene function shaped the nickel hyperaccumulation trait in Noccaea caerulescens

Authors: Belloeil, C., Garcia de la Torre, V. S., Contreras Aguilera, R., Kupper, H., Lopez-Roques, C., Iampetro, C., Vandecasteele, C., Klopp, C., Launay-Avon, A., Leemhuis, W., Yamjabok, J., van den Heuvel, J., Aarts, M. G. M., Quintela Sabaris, C., Thomine, S., MERLOT, S.

Date: 2025-07-25 · Version: 1

DOI: 10.1101/2025.07.22.664359

Model Organism: Noccaea caerulescens

nickel hyperaccumulation Noccaea caerulescens genome assembly transcriptomic analysis metal transporters

A hierarchical abscission program regulates reproductive allocation in Prunus yedoensis and Prunus sargentii

Authors: Jeon, W.-T., Kim, J.-A., Cheon, A., Lee, S. S. Y., Kang, J., Lee, J.-M., Lee, Y.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.08.663657

Model Organism: Prunus yedoensis, Prunus sargentii

organ abscission abscission zone ethylene signaling reactive oxygen species Prunus reproductive biology

MdBRC1 and MdFT2 Interaction Fine-Tunes Bud Break Regulation in Apple

Authors: Gioppato, H. A., Estevan, J., Al Bolbol, M., Soriano, A., Garighan, J., Jeong, K., Georget, C., Soto, D. G., El Khoury, S., Falavigna, V. d. S., George, S., Perales, M., Andres, F.

Date: 2025-06-24 · Version: 1

DOI: 10.1101/2025.06.20.660803

Model Organism: Malus domestica

bud dormancy MdBRC1 MdFT2 transcriptomic analysis protein interaction

Ethylene Receptor Gain- and Loss-of-function Mutants Reveal an ETR1-dependent Transcriptional Network in Roots

Authors: White, M. G., Harkey, A., Muhlemann, J. K., Olex, A. L., Pfeffer, N. J., Houben, M., Binder, B., Muday, G. K.

Date: 2025-06-22 · Version: 3

DOI: 10.1101/2024.06.26.600793

Model Organism: Arabidopsis thaliana

ethylene signaling ETR1 root development gene regulatory network Arabidopsis

Constitutive expression of full-length or partial of SOC1 genes for yield enhancement in tomato

Authors: Danial, G. H., Jaikham, J., Song, G.-q.

Date: 2025-06-06 · Version: 1

DOI: 10.1101/2025.06.03.657751

Model Organism: Solanum lycopersicum

SOC1 tomato fruit yield heterologous gene expression branching transcriptomic analysis

EBSn, a robust synthetic reporter for monitoring ethylene responses in plants

Authors: Fernandez-Moreno, J.-P., Fenech, M., Yaschenko, A. E., Zhao, C., Neubauer, M., Davis, H. N., Marchi, A. J., Concannon, R., Keren-Keiserman, A., Reuveni, M., Levitsky, V. G., Oshchepkov, D., Dolgikh, V., Goldshmidt, A., Ascencio-Ibanez, J. T., Zemlyanskaya, E., Alonso, J. M., Stepanova, A. N.

Date: 2025-05-28 · Version: 1

DOI: 10.1101/2025.05.23.655144

Model Organism: Arabidopsis thaliana

ethylene signaling EIN3 transcription factor synthetic promoter GUS reporter assay Arabidopsis thaliana

Rapid ethylene-triggered protein complex remodeling in dark grown hypocotyls

Authors: Lee, Y., Park, H. L., Yoon, G. M., Szymanski, D. B.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654145

Model Organism: General

ethylene signaling protein multimerization hypocotyl development quantitative proteomics seedling morphogenesis

SnRK1.1 Coordinates Organ-Specific Growth-Defense Programs via Transcriptomic Rewiring in Arabidopsis thaliana

Authors: Kalachova, T., Muller, K., Lacek, J., Pree, S., Antonova, A., Bondarenko, O., Burketova, L., Retzer, K., Weckwerth, W.

Date: 2025-04-29 · Version: 1

DOI: 10.1101/2025.04.25.650715

Model Organism: Arabidopsis thaliana

SnRK1 KIN10 transcriptome reprogramming plant immunity tissue-specific signaling

An ERF transcription factor StPTI5, a novel regulator of endophyte community maintenance in potato

Authors: Lukan, T., Kraigher, B., Pogacar, K., Stare, K., Grubar Kovacic, T., Zagorscak, M., Petek, M., Stefanic, P., Vozelj, A., Levak, V., Mahkovec Povalej, T., Garcia, J. M., Pozo, M. J., Mandic-Mulec, I., Gruden, K.

Date: 2025-04-24 · Version: 1

DOI: 10.1101/2025.04.24.650297

Model Organism: Solanum tuberosum

PTI5 ethylene signaling plant immunity beneficial microbes Solanum tuberosum

HISTONE DEACETYLASE COMPLEX 1 modulates sepal length through the ethylene-ROS module

Authors: Xiang, D., Qiu, D., Zhang, R., He, X., Xu, S., Zhou, M., Hong, L.

Date: 2025-03-31 · Version: 1

DOI: 10.1101/2025.03.27.645679

Model Organism: Arabidopsis thaliana

HISTONE DEACETYLASE COMPLEX 1 sepal size regulation ethylene signaling reactive oxygen species Arabidopsis thaliana

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