Keywords: paralog processing, transcriptome reprogramming, transcriptomics, Arabidopsis thaliana

Latest 274 Papers

Benzoxazinoid-mediated microbiome feedbacks enhance Arabidopsis growth and defense

Authors: Stengele, K., Stauber, L., Thoenen, L., Janse van Rensburg, H., D'Adda, V., Schlaeppi, K.

Date: 2025-08-29 · Version: 2

DOI: 10.1101/2024.10.21.619081

Model Organism: Arabidopsis thaliana

benzoxazinoids soil microbiome feedback Arabidopsis thaliana defence priming Botrytis cinerea resistance

PAM18-3, a J-domain protein, maintains mitochondrial integrity and plant growth and development in Arabidopsis thaliana

Authors: Sharma, N., S, S., Sahi, C.

Date: 2025-08-28 · Version: 1

DOI: 10.1101/2025.08.25.671915

Model Organism: Arabidopsis thaliana

PAM18-3 mitochondrial protein import Arabidopsis thaliana alternative oxidase retrograde signaling

The Arabidopsis UMAMIT30 transporter contributes to amino acid root exudation

Authors: Agorsor, I. D. K., Khadka, P., Danna, C. H.

Date: 2025-08-27 · Version: 1

DOI: 10.1101/2025.08.23.671809

Model Organism: Arabidopsis thaliana

root exudation amino acid transporter UMAMIT30 Arabidopsis thaliana glutamine

DECREASE IN DNA METHYLATION 1-mediated epigenetic regulation maintains gene expression balance required for heterosis in Arabidopsis thaliana

Authors: Matsuo, K., Wu, R., Yonechi, H., Murakami, T., Takahashi, S., Kamio, A., Akter, M. A., Kamiya, Y., Nishimura, K., Matsuura, T., Tonosaki, K., Shimizu, M., Ikeda, Y., Kobayashi, H., Seki, M., Dennis, E. S., Fujimoto, R.

Date: 2025-08-26 · Version: 1

DOI: 10.1101/2025.08.21.671646

Model Organism: Arabidopsis thaliana

heterosis DNA methylation DDM1 Arabidopsis thaliana transcriptomics

Arabidopsis Group I Pumilio RNA-binding factors are vital for embryo development and balancing between growth and stress resistance

Authors: Wu, W., Li, D., Lin, D., Xu, W., Chen, T., Chen, X., Guo, W., Long, Z., Xu, X., Tu, X., Huang, J.

Date: 2025-08-23 · Version: 1

DOI: 10.1101/2025.08.21.671196

Model Organism: Arabidopsis thaliana

Pumilio RNA binding proteins Arabidopsis thaliana stress adaptation anthocyanin biosynthesis embryonic lethality

TPS Proteins coordinate plant growth with sugar availability via the SnRK1 Kinase

Authors: Reis-Barata, D., Confraria, A., Margalha, L., Peixoto, B., Lopes, F. L., Belda-Palazon, B., Jurke, B., Arrivault, S., Shukla, V., Feil, R., Licausi, F., Kaschani, F., Kaiser, M., Caldana, C., Stitt, M., Lunn, J. E., Baena-Gonzalez, E.

Date: 2025-08-20 · Version: 1

DOI: 10.1101/2025.08.17.670254

Model Organism: Arabidopsis thaliana

trehalose 6-phosphate (T6P)SnRK1 kinase TPS5/6/7 proteins Arabidopsis thaliana nutrient signaling

Control of Chloroplast Integrity by the Jasmonate Signaling Pathway is Linked to Growth-Defense Balance

Authors: Howe, G. A., Johnson, L. Y., Major, I. T., Guo, Q., Yoshida, Y., Kramer, D. M.

Date: 2025-08-20 · Version: 1

DOI: 10.1101/2025.08.15.670541

Model Organism: Arabidopsis thaliana

jasmonate signaling JAZ transcriptional repressors chloroplast dismantling MYC2 Arabidopsis thaliana

Identification of a novel link connecting indole-3-acetamide with abscisic acid biosynthesis and signaling

Authors: Moya-Cuevas, J., Ortiz-Garcia, P., Gonzalez Ortega-Villizan, A., Viguera-Leza, I., Perez-Gonzalez, A., Paz-Ares, J., Alonso-Blanco, C., Vicente-Carbajosa, J., Pollmann, S.

Date: 2025-08-20 · Version: 1

DOI: 10.1101/2025.08.15.670611

Model Organism: Arabidopsis thaliana

indole-3-acetamide (IAM)abscisic acid (ABA) signaling Arabidopsis thaliana GWAS hormone crosstalk

RNA m6A Methylation Control Salt Response by Affecting Photosynthesis Capacity

Authors: Yang, Q., Wang, S., Si, J., Pang, Q., Zhang, A.

Date: 2025-08-18 · Version: 1

DOI: 10.1101/2025.08.13.670251

Model Organism: Arabidopsis thaliana

m6A RNA methylation salt stress Arabidopsis thaliana MeRIP‑seq photosynthesis inhibition

A mechanistic framework for the recognition of chemically diverse brassinosteroids by BRI1-family receptor kinases

Authors: Caregnato, A., Chen, H., Kvasnica, M., Hohmann, U., Oklestkova, J., Ferrer, K., Broger, L., Hothorn, L. A., Strnad, M., Hothorn, M.

Date: 2025-08-09 · Version: 1

DOI: 10.1101/2025.08.08.669299

Model Organism: Arabidopsis thaliana

brassinosteroids receptor binding kinetics Arabidopsis thaliana structural plasticity mutagenesis

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