Keywords: paralog processing, transcriptome reprogramming, transcriptomics, Arabidopsis thaliana

Latest 274 Papers

A role of villin-dependent F-actin organization in peroxisome motility in Arabidopsis cells

Authors: Huang, C., Koenig, A., Lee, Y.-R. J., Shi, Y., Hu, J., Liu, B.

Date: 2025-04-24 · Version: 1

DOI: 10.1101/2025.04.23.650090

Model Organism: Arabidopsis thaliana

Villin proteins F-actin organization Peroxisome motility Arabidopsis thaliana Mutant analysis

ERF transcription factor regulons underpin growth-defence trade-off under acute heat stress in rice seedlings

Authors: Nair, A. U., Vishwakarma, S., Guha, T., Kadumuri, R. V., Fritschi, F. B., Chavali, S., Allu, A. D.

Date: 2025-04-22 · Version: 1

DOI: 10.1101/2025.04.21.649784

Model Organism: Oryza sativa

heat stress Oryza sativa seedling transcriptomics ethylene responsive factors phytohormone treatment

A citrullination-ubiquitination pathway controls pre-meiotic H1 eviction and is essential for gametogenesis in Arabidopsis

Authors: Li, Y., Fei, D., Schubert, J., Rutowicz, K., Kaczmarska, Z., Linares, A., Giraldo-Fonseca, A., Bischof, S., Grossniklaus, U., Baroux, C.

Date: 2025-04-22 · Version: 1

DOI: 10.1101/2025.04.18.649492

Model Organism: Arabidopsis thaliana

linker histone H1.1 citrullination ubiquitination spore mother cell Arabidopsis thaliana

The autophagy-related genes AtATG5 and AtATG7 influence reserve mobilisation and responses to ABA during seed germination in Arabidopsis thaliana

Authors: Contreras, E., Sanchez-Vicente, I., Pastor-Mora, E., Aylon-Rodriguez, M., Gonzalez-Ceballos, M., Delgado-Gutierrez, M. A., Lorenzo, O., Vicente-Carbajosa, J., Iglesias-Fernandez, R.

Date: 2025-04-21 · Version: 2

DOI: 10.1101/2024.05.15.593177

Model Organism: Arabidopsis thaliana

autophagy Arabidopsis thaliana ABA signaling ATG5/ATG7 ABI5

A transcriptional dissection of the petty spurge (Euphorbia peplus L.) reproductive structure

Authors: Johnson, A. R., Bao, A., Frank, M. H.

Date: 2025-04-17 · Version: 2

DOI: 10.1101/2024.05.06.592779

Model Organism: Euphorbia peplus

cyathium transcriptomics floral development genes SEP1 paralogs Euphorbia peplus

Large-scale single-cell profiling of stem cells uncovers redundant regulators of shoot development and yield trait variation

Authors: Xu, X., Passalacqua, M., Rice, B., Demesa-Arevalo, E., Kojima, M., Takebayashi, Y., Harris, B., Sakakibara, H., Gallavotti, A., Gillis, J., Jackson, D.

Date: 2025-04-17 · Version: 2

DOI: 10.1101/2024.03.04.583414

Model Organism: Multi-species

single-cell RNA sequencing shoot stem cells Arabidopsis thaliana Zea mays stem cell regulators

Dominance modifiers at the Arabidopsis self-incompatibility locus retain proto-miRNA features and act through non-canonical pathways

Authors: Batista, R. A., Durand, E., Mörchen, M., Azevedo-Favory, J., Simon, S., Dubin, M., Kumar, V., Lacoste, E., Cruaud, C., Blassiau, C., Barois, M., Holl, A.-C., Ponitzki, C., Faure, N., Marande, W., Vautrin, S., Fobis-Loisy, I., Aury, J.-M., Legrand, S., Krämer, U., Lagrange, T., Vekemans, X., Castric, V.

Date: 2025-04-12 · Version: 3

DOI: 10.1101/2024.05.01.591913

Model Organism: Arabidopsis thaliana

self-incompatibility small RNA precursors dominance hierarchy Arabidopsis thaliana non‑canonical gene silencing