Keywords: paralog processing, transcriptomic analysis, GWAS, cell wall remodeling

Latest 30 Papers

MdBRC1 and MdFT2 Interaction Fine-Tunes Bud Break Regulation in Apple

Authors: Gioppato, H. A., Estevan, J., Al Bolbol, M., Soriano, A., Garighan, J., Jeong, K., Georget, C., Soto, D. G., El Khoury, S., Falavigna, V. d. S., George, S., Perales, M., Andres, F.

Date: 2025-06-24 · Version: 1

DOI: 10.1101/2025.06.20.660803

Model Organism: Malus domestica

bud dormancy MdBRC1 MdFT2 transcriptomic analysis protein interaction

Cell layer-specific modification of cell wall is associated with exo-mesocarp split in pistachio (Pistacia vera L.)

Authors: Zhang, S., Wang, M., Eagle, S., Chernikova, A., Bedell, K. M., Tran, P., Lee, C., Adaskaveg, J. A., Wei, Y., Lopez, R., Basco, A., Gordon, P., Blanco-Ulate, B., Monroe, G., Drakakaki, G.

Date: 2025-06-24 · Version: 1

DOI: 10.1101/2025.06.18.660460

Model Organism: Pistacia vera

Pistacia vera hull development cell wall remodeling pectin modification fruit split layer-specific cell expansion

Constitutive expression of full-length or partial of SOC1 genes for yield enhancement in tomato

Authors: Danial, G. H., Jaikham, J., Song, G.-q.

Date: 2025-06-06 · Version: 1

DOI: 10.1101/2025.06.03.657751

Model Organism: Solanum lycopersicum

SOC1 tomato fruit yield heterologous gene expression branching transcriptomic analysis

Galactan mobilization during carbon starvation compromises cell wall-mediated fungal resistance in Arabidopsis

Authors: Reckleben, L., Morton, R. N., Munzert-Eberlein, K. S., Thiel, S., Rautengarten, C., Tan, V., Harres, K. L., Zanoni, L., Ebert, B., Engelsdorf, T.

Date: 2025-06-01 · Version: 1

DOI: 10.1101/2025.05.28.656597

Model Organism: Arabidopsis thaliana

cell wall remodeling galactose salvage dark‑induced starvation Arabidopsis thaliana pathogen penetration resistance

Spatial heterogeneity of disease infection attributable to neighbor genotypic identity in barley cultivars

Authors: Akram, I., Rohr, L., Shimizu, K. K., Shimizu-Inatsugi, R., Sato, Y.

Date: 2025-04-24 · Version: 1

DOI: 10.1101/2025.04.22.650038

Model Organism: Hordeum vulgare

spatial heterogeneity neighbor genotype effect barley disease resistance GWAS SpATS

High throughput screen of NPQ in sorghum shows highly polygenic architecture of photoprotection

Authors: Vath, R. L., Fernandes, S., Monier, B., Glowacka, K., Walter, J., Lipka, A. E., Ferguson, J. N., Bernacchi, C., Pederson, T., Kromdijk, J.

Date: 2025-04-22 · Version: 1

DOI: 10.1101/2025.04.18.649521

Model Organism: Sorghum bicolor

photoprotection non-photochemical quenching Sorghum bicolor GWAS TWAS

Ethylene and ROS Signaling Are Key Regulators of Lateral Root Development under Salt Stress in Tomato

Authors: Rahmati Ishka, M., Zhao, J., Sussman, H., Mohanty, D., Craft, E., Yu, L., Pineros, M., Tester, M., Kawa, D., Mittler, R., Nelson, A., Fei, Z., Julkowska, M. M.

Date: 2025-04-15 · Version: 2

DOI: 10.1101/2024.06.20.599848

Model Organism: Solanum lycopersicum

root system architecture salt stress GWAS bulk segregant analysis RNA-Seq

Host genotype shapes root mycobiota in durum wheat

Authors: TRINQUIER, M., COLOMBO, M., FREVILLE, H., JACQUES, D., ROCHER, A., LEFEBVRE, B., ROUX, C.

Date: 2025-03-06 · Version: 3

DOI: 10.1101/2024.10.27.616629

Model Organism: Triticum aestivum

wheat genotype root endophytic mycobiota ITS2 barcoding GWAS QTL

MYB59 is linked to natural variation of water use associated with warmer temperatures in Arabidopsis thaliana

Authors: Ferguson, J. N., Brendel, O., Bechtold, U.

Date: 2025-02-28 · Version: 1

DOI: 10.1101/2025.02.27.640580

Model Organism: Arabidopsis thaliana

water-use variation Arabidopsis thaliana climate adaptation GWAS MYB59

Genetic control of the leaf ionome in pearl millet and correlation with root and agromorphological traits

Authors: Nakombo-Gbassault, P., Arenas, S., Affortit, P., Faye, A., Flis, P., Sine, B., Moukouanga, D., Gantet, P., Kosh Komba, E., Kane, N., Bennett, M., Wells, D., Cubry, P., Bailey, E., Vigouroux, Y., Grondin, A., Laplaze, L.

Date: 2025-02-03 · Version: 1

DOI: 10.1101/2025.01.30.635630

Model Organism: Pennisetum glaucum

ionomics nutrient acquisition pearl millet GWAS candidate genes

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