Keywords: paralog processing, transcriptomic analysis, drought tolerance, genome assembly

Latest 34 Papers

Drought-associated genes exhibit high constitutive expression in Quercus douglasii, a drought tolerant California oak

Authors: Steele, S., Peck, L. D., Sork, V. L.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.07.663554

drought tolerance constitutive gene expression plasticity RNA-Seq Quercus douglasii

Secretory carrier membrane proteins assist with aquaporin trafficking in Arabidopsis.

Authors: Jiang, Q., Vandorpe, M., fox, a. R., Vermeersch, M., Mylle, E., Cuadrado, A. F., Kraus, J., Liu, H., Eeckhout, D., Navarre, C., Courtoy, A., Jacobs, T. B., Dragwidge, J. M., De Smet, I., Pleskot, R., Chaumont, F., Van Damme, D.

Date: 2025-07-06 · Version: 1

DOI: 10.1101/2025.07.03.662988

Model Organism: Arabidopsis thaliana

SCAMP proteins Arabidopsis thaliana aquaporins (PIPs)drought tolerance protein trafficking

Tomato leaf transcriptomic changes promoted by long-term water scarcity stress can be largely prevented by a fungal-based biostimulant

Authors: Lopez-Serrano, L., Ferez-Gomez, A., Romero-Aranda, R., Jaime Fernandez, E., Leal Lopez, J., Fernandez Baroja, E., Almagro, G., Dolezal, K., Novak, O., Diaz, L., Bautista, R., Leon Morcillo, R. J., Pozueta Romero, J.

Date: 2025-06-28 · Version: 1

DOI: 10.1101/2025.06.26.661737

Model Organism: Solanum lycopersicum

water deficit Trichoderma harzianum culture filtrate tomato drought tolerance transcriptome

MdBRC1 and MdFT2 Interaction Fine-Tunes Bud Break Regulation in Apple

Authors: Gioppato, H. A., Estevan, J., Al Bolbol, M., Soriano, A., Garighan, J., Jeong, K., Georget, C., Soto, D. G., El Khoury, S., Falavigna, V. d. S., George, S., Perales, M., Andres, F.

Date: 2025-06-24 · Version: 1

DOI: 10.1101/2025.06.20.660803

Model Organism: Malus domestica

bud dormancy MdBRC1 MdFT2 transcriptomic analysis protein interaction

The biofuel producing legume tree, Pongamia pinnata, offers strong potential for carbon sequestration

Authors: Chen, A., Scott, P., Gresshoff, P. M., Ferguson, B. J.

Date: 2025-06-08 · Version: 1

DOI: 10.1101/2025.06.04.657758

Model Organism: Pongamia pinnata

Pongamia pinnata biofuel feedstock carbon sequestration growth variability drought tolerance

Constitutive expression of full-length or partial of SOC1 genes for yield enhancement in tomato

Authors: Danial, G. H., Jaikham, J., Song, G.-q.

Date: 2025-06-06 · Version: 1

DOI: 10.1101/2025.06.03.657751

Model Organism: Solanum lycopersicum

SOC1 tomato fruit yield heterologous gene expression branching transcriptomic analysis

Whole-genome sequencing reveals the molecular basis of sex determination in the dioecious wild yam Dioscorea tokoro

Authors: Kudoh, A., Natsume, S., Sugihara, Y., Kato, H., Abe, A., Oikawa, K., Shimizu, M., Itoh, K., Tsujimura, M., Takano, Y., Sakai, T., Adachi, H., Ohta, A., Ohtsu, M., Ishizaki, T., Terachi, T., Terauchi, R.

Date: 2025-04-30 · Version: 1

DOI: 10.1101/2025.04.28.650915

Model Organism: Dioscorea tokoro

dioecy sex determination XY system Dioscorea tokoro genome assembly

Structural variations contribute to subspeciation and heterosis in rice

Authors: Dan, Z., Chen, Y., Huang, W.

Date: 2025-04-14 · Version: 2

DOI: 10.1101/2024.11.03.621459

Model Organism: Oryza sativa

heterosis structural variants rice subspeciation indica japonica genome assembly

Pathogenicity and genome assembly of a Pythium aphanidermatum isolate causing damping-off in amaranth in controlled environment agriculture

Authors: Thanyasiriwat, T., Kawicha, P., MacDonald, S., Sangdee, A., Tongyoo, P., Denby, K.

Date: 2025-04-10 · Version: 1

DOI: 10.1101/2025.04.10.648180

Model Organism: Amaranthus

Pythium aphanidermatum amaranth genome assembly pathogenicity assays effector proteins

Loss-of-function of the drought-induced genes GASA3 and AFP1 confers enhanced drought tolerance in Arabidopsis thaliana

Authors: Bhattacharyya, S., Turysbek, B., Lorenz, S. D., Rosales, D. C., Shoaib, Y., Gutbrod, K., Doermann, P., Chigri, F., Vothknecht, U. C.

Date: 2025-04-06 · Version: 1

DOI: 10.1101/2025.04.03.647048

Model Organism: Arabidopsis thaliana

drought tolerance GASA3 AFP1 abscisic acid (ABA)stomatal aperture

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