Keywords: paralog processing, transcriptomics, ascorbate, spatial transcriptomics, root development, Zea mays

Latest 73 Papers

Non-catalytic and catalytic TREHALOSE-6-PHOSPHATE SYNTHASES interact with RAMOSA3 to control maize development.

Authors: Tran, T., Claeys, H., Abraham Juarez, M. J., Vi, L. S., Xu, X., Michalski, K., Chou, T. H., Iohannes, S. D., Boumpas, P., Williams, Z., Sheppard, S., Griffiths, C., Paul, M., Furukawa, H., Jackson, D.

Date: 2025-08-12 · Version: 1

DOI: 10.1101/2025.08.09.669499

Model Organism: Zea mays

Trehalose-6-phosphate non‑catalytic TPS Zea mays protein complex developmental regulation

ZmCRY1s interact with GL2 in a blue light dependent manner to regulate epidermal wax composition in Zea mays

Authors: Zhao, Z., Feng, F., Liu, Y., Liu, Y., Wang, F., Ni, Y., Liang, H., Hu, W., Wang, S., Hao, Y., Li, X., Li, J., Wang, J., Zhang, P., Liu, H.

Date: 2025-08-06 · Version: 1

DOI: 10.1101/2025.08.06.668858

Model Organism: Zea mays

cryptochrome Zea mays blue light signaling UV-B tolerance epidermal wax biosynthesis

A sublethal drought and rewatering time course reveals intricate patterning of responses in the annual Arabidopsis thaliana

Authors: Fitzek-Campbell, E., Psaroudakis, D., Weisshaar, B., Junker, A., Braeutigam, A.

Date: 2025-07-27 · Version: 1

DOI: 10.1101/2025.07.25.666782

Model Organism: Arabidopsis thaliana

drought stress Arabidopsis thaliana transcriptomics high‑throughput phenotyping biomarker transcripts

Transcriptomics uncovers molecular mechanisms underlying salt-inhibited root growth in Festuca rubra

Authors: Lan, B., Ru, D., Du, F. K., Yin, K.

Date: 2025-07-26 · Version: 1

DOI: 10.1101/2025.07.22.665687

Model Organism: Festuca rubra

salt stress root growth inhibition Festuca rubra transcriptomics hormone signaling

Plant-Compatible Xenium In Situ Sequencing: Optimised Protocol for Spatial Transcriptomics in Medicago truncatula Roots and Nodules

Authors: Jhu, M.-Y., Heffer, J., Deamer, A., Moraes, T. A., Piskorz, A. M., Xia, C.

Date: 2025-07-25 · Version: 1

DOI: 10.1101/2025.07.22.663073

Model Organism: Medicago truncatula

spatial transcriptomics Xenium in situ sequencing Medicago truncatula root nodules autofluorescence mitigation

The transcriptional mechanism behind Mimosa pudica leaf-folding in response to mechanical disturbance

Authors: Buti, M., Checcucci, A., Vergata, C., Renna, L., Pollastri, S., Loreto, F., Mancuso, S., Martinelli, F.

Date: 2025-07-21 · Version: 1

DOI: 10.1101/2025.07.17.665295

Model Organism: Mimosa pudica

Mimosa pudica mechanical stress chlorophyll fluorescence transcriptomics stress‑responsive gene expression

Enhancement of Arabidopsis growth by Enterobacter sp. SA187 under elevated CO2 is dependent on ethylene signalling activation and primary metabolism reprogramming

Authors: Ilyas, A., Mauve, C., Pateyron, S., Paysant-Le Roux, C., Bigeard, J., Hodges, M., de Zelicourt, A.

Date: 2025-07-09 · Version: 1

DOI: 10.1101/2025.07.08.663752

Model Organism: Arabidopsis thaliana

Enterobacter sp. SA187 elevated CO2 Arabidopsis thaliana phytohormone signaling transcriptomics

Integrative Multi-Omics Analysis Reveals Stress-Specific Molecular Architectures in Soybean under Drought and Rust Infection

Authors: Husein, G., Castro-Moretti, F. R., Prado, M., Amorim, L., Mazzafera, P., Canales, J., Monteiro-Vitorello, C. B.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.07.663534

Model Organism: Glycine max

Asian soybean rust drought stress transcriptomics metabolomics co-expression network

Medicago truncatula CORYNE modulates inflorescence meristem branching, nutrient signaling, and arbuscular mycorrhizal symbiosis

Authors: Orosz, J., Lin, E. X., Torres Ascurra, Y. C., Kappes, M., Lindsay, P. L., Bashyal, S., Everett, H., Gautam, C. K., Jackson, D., Mueller, L. M.

Date: 2025-07-02 · Version: 3

DOI: 10.1101/2024.09.20.614181

Model Organism: Medicago truncatula

CLAVATA signaling CRN pseudokinase arbuscular mycorrhizal symbiosis Meristem branching transcriptomics

Molecular characterization of flower bud dormancy under constrained temperatures unveils a shallow dormancy stage induced by cold deprivation

Authors: Fouche, M., Bonnet, H., Prigent, S., Wenden, B.

Date: 2025-07-01 · Version: 1

DOI: 10.1101/2025.06.27.661981

Model Organism: Prunus avium

winter dormancy temperature stress sweet cherry transcriptomics shallow dormancy phase

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