Keywords: paralog processing, transcriptomics, climate change, forest management

Latest 47 Papers

In situ near-infrared non-destructive monitoring of sugar accumulation reveals that single berries ripening takes only 20 days

Authors: Tavernier, F., Motelica-Heino, E., Thomas, M., Herbold, T., Shi, M., Le Cunff, L., Romieu, C., Segura, V.

Date: 2025-09-11 · Version: 2

DOI: 10.1101/2024.12.10.627588

climate change berry ripening near‑infrared spectroscopy partial least squares regression grapevine

Light on its feet: Acclimation to high and low diurnal light is flexible in Chlamydomonas reinhardtii

Authors: Dupuis, S., Chastain, J. L., Han, G., Zhong, V., Gallaher, S. D., Nicora, C. D., Purvine, S. O., Lipton, M. S., Niyogi, K. K., Iwai, M., Merchant, S. S.

Date: 2025-09-02 · Version: 1

DOI: 10.1101/2025.08.28.672467

Model Organism: Chlamydomonas reinhardtii

photoprotection diurnal light acclimation thylakoid ultrastructure transcriptomics proteomics

DECREASE IN DNA METHYLATION 1-mediated epigenetic regulation maintains gene expression balance required for heterosis in Arabidopsis thaliana

Authors: Matsuo, K., Wu, R., Yonechi, H., Murakami, T., Takahashi, S., Kamio, A., Akter, M. A., Kamiya, Y., Nishimura, K., Matsuura, T., Tonosaki, K., Shimizu, M., Ikeda, Y., Kobayashi, H., Seki, M., Dennis, E. S., Fujimoto, R.

Date: 2025-08-26 · Version: 1

DOI: 10.1101/2025.08.21.671646

Model Organism: Arabidopsis thaliana

heterosis DNA methylation DDM1 Arabidopsis thaliana transcriptomics

Simulating the Impacts of Climate Change on UH Manoa Lettuce (Lactuca sativa) Growth by Modifying Air Temperature, Soil Water Availability, and Atmospheric CO2 Concentration

Authors: Yos, N., Mora, C., Webster, K., McDowell, K.

Date: 2025-08-18 · Version: 1

DOI: 10.1101/2025.08.13.670242

Model Organism: Lactuca sativa

climate change CO₂ concentration temperature stress water availability Lactuca sativa

A sublethal drought and rewatering time course reveals intricate patterning of responses in the annual Arabidopsis thaliana

Authors: Fitzek-Campbell, E., Psaroudakis, D., Weisshaar, B., Junker, A., Braeutigam, A.

Date: 2025-07-27 · Version: 1

DOI: 10.1101/2025.07.25.666782

Model Organism: Arabidopsis thaliana

drought stress Arabidopsis thaliana transcriptomics high‑throughput phenotyping biomarker transcripts

Transcriptomics uncovers molecular mechanisms underlying salt-inhibited root growth in Festuca rubra

Authors: Lan, B., Ru, D., Du, F. K., Yin, K.

Date: 2025-07-26 · Version: 1

DOI: 10.1101/2025.07.22.665687

Model Organism: Festuca rubra

salt stress root growth inhibition Festuca rubra transcriptomics hormone signaling

The transcriptional mechanism behind Mimosa pudica leaf-folding in response to mechanical disturbance

Authors: Buti, M., Checcucci, A., Vergata, C., Renna, L., Pollastri, S., Loreto, F., Mancuso, S., Martinelli, F.

Date: 2025-07-21 · Version: 1

DOI: 10.1101/2025.07.17.665295

Model Organism: Mimosa pudica

Mimosa pudica mechanical stress chlorophyll fluorescence transcriptomics stress‑responsive gene expression

Contrasting needle physiological strategies to soil nutrient scarcity in radiata pine plantations

Authors: Ruiz de Larrinaga, L., San Miguel-Oti, F., Monasterio, A., Artetxe, U., Munne-Bosch, S., Mesa, T., Moreaux, C., Ortega-Barrueta, U., Sertutxa, U., Pena, L., Ametzaga, I., Yuste, J. C., Esteban, R.

Date: 2025-07-19 · Version: 1

DOI: 10.1101/2025.07.15.664982

Model Organism: Pinus radiata

Pinus radiata soil nutrient scarcity drought stress photosynthetic performance forest management

Impacts of projected elevated temperature on estimated chilling accumulation and bud break of rabbiteye blueberries

Authors: Lawas, L. M., Rossi, G., Salazar Gutierrez, M., Tian, D., Leisner, C.

Date: 2025-07-12 · Version: 1

DOI: 10.1101/2025.07.08.663765

Model Organism: Vaccinium virgatum

climate change chilling accumulation phenological development Vaccinium virgatum growth chamber experiment

Enhancement of Arabidopsis growth by Enterobacter sp. SA187 under elevated CO2 is dependent on ethylene signalling activation and primary metabolism reprogramming

Authors: Ilyas, A., Mauve, C., Pateyron, S., Paysant-Le Roux, C., Bigeard, J., Hodges, M., de Zelicourt, A.

Date: 2025-07-09 · Version: 1

DOI: 10.1101/2025.07.08.663752

Model Organism: Arabidopsis thaliana

Enterobacter sp. SA187 elevated CO2 Arabidopsis thaliana phytohormone signaling transcriptomics

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