Keywords: paralog processing, transcriptomics, yield, ascorbate, Chlamydomonas reinhardtii

Latest 49 Papers

Integrative Multi-Omics Analysis Reveals Stress-Specific Molecular Architectures in Soybean under Drought and Rust Infection

Authors: Husein, G., Castro-Moretti, F. R., Prado, M., Amorim, L., Mazzafera, P., Canales, J., Monteiro-Vitorello, C. B.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.07.663534

Model Organism: Glycine max

Asian soybean rust drought stress transcriptomics metabolomics co-expression network

Medicago truncatula CORYNE modulates inflorescence meristem branching, nutrient signaling, and arbuscular mycorrhizal symbiosis

Authors: Orosz, J., Lin, E. X., Torres Ascurra, Y. C., Kappes, M., Lindsay, P. L., Bashyal, S., Everett, H., Gautam, C. K., Jackson, D., Mueller, L. M.

Date: 2025-07-02 · Version: 3

DOI: 10.1101/2024.09.20.614181

Model Organism: Medicago truncatula

CLAVATA signaling CRN pseudokinase arbuscular mycorrhizal symbiosis Meristem branching transcriptomics

Molecular characterization of flower bud dormancy under constrained temperatures unveils a shallow dormancy stage induced by cold deprivation

Authors: Fouche, M., Bonnet, H., Prigent, S., Wenden, B.

Date: 2025-07-01 · Version: 1

DOI: 10.1101/2025.06.27.661981

Model Organism: Prunus avium

winter dormancy temperature stress sweet cherry transcriptomics shallow dormancy phase

Zinc deficiency induces spatially distinct responses in roots and impacts ZIP12-dependent zinc homeostasis in Arabidopsis

Authors: Thiebaut, N., Persson, D. P., Sarthou, M., Stevenne, P., Bosman, B., Carnol, M., Fanara, S., Verbruggen, N., Hanikenne, M.

Date: 2025-06-30 · Version: 1

DOI: 10.1101/2025.06.26.661794

Model Organism: Arabidopsis thaliana

zinc deficiency root apical meristem ZIP12 transcriptomics ionomics

Thermotolerance in Chia (Salvia hispanica L.) is Mediated by Rapid Heat-Induced Transcriptomic Reprogramming and Lipid Remodelling in Leaves

Authors: Zare, T., Kehelpannala, C., Bhatnagar, A., Rupasinghe, T., Ebert, B., Fournier-Level, A., Roessner, U.

Date: 2025-06-02 · Version: 1

DOI: 10.1101/2025.05.30.656991

Model Organism: Salvia hispanica

heat stress Salvia hispanica transcriptomics lipidomics calcium signaling

Enhanced cell aggregation in the Chlamydomonas reinhardtii rbo1 mutant in response to multifactorial stress combination

Authors: Pascual, L. S., Mohanty, D., Sinha, R., Nguyen, T. T., Rowland, L., Lyu, Z., Joshi, T., Mooney, B. P., Gomez-Cadenas, A., Fritschi, F. B., Zandalinas, S. I., Mittler, R.

Date: 2025-05-19 · Version: 1

DOI: 10.1101/2025.05.16.654601

Model Organism: Chlamydomonas reinhardtii

multifactorial stress combination Chlamydomonas reinhardtii respiratory burst oxidase homolog 1 (rbo1)cell aggregation proteomic response

Sustaining the cell energy in dynamic environments requires photosynthetic electron flows with diverse bandwidths

Authors: Madireddi, S. K., Adler, L., Stoffel, C., Schroeder, M., Tolleter, D., Burlacot, A.

Date: 2025-05-19 · Version: 1

DOI: 10.1101/2025.05.16.654609

Model Organism: Chlamydomonas reinhardtii

photosynthetic electron flow fluctuating light Chlamydomonas reinhardtii ATP production photoprotection

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

Heterologous expression of the cyanobacterial fructose-1,6-/sedoheptulose-1,7-bisphosphatase in Chlamydomonas reinhardtii causes increased cell size and biomass productivity in mixotrophic conditions

Authors: Bussola, M., Perozeni, F., Meloni, M., Pivato, M., Zaffagnini, M., Ballottari, M.

Date: 2025-05-03 · Version: 1

DOI: 10.1101/2025.05.02.651950

Model Organism: Chlamydomonas reinhardtii

FBP/SBPase overexpression Carbon fixation Chlamydomonas reinhardtii Photosynthetic efficiency Mixotrophic growth

Comparative multi-omics profiling of Gossypium hirsutum and Gossypium barbadense fibers at high temporal resolution reveals key differences in polysaccharide composition and associated glycosyltransferases

Authors: Swaminathan, S., Lee, Y., Grover, C. E., DeTemple, M. F., Mugisha, A. S., Sichterman, L. E., Yang, P., Xie, J., Wendel, J. F., Szymanski, D. B., Zabotina, O. A.

Date: 2025-04-30 · Version: 1

DOI: 10.1101/2025.04.26.650795

Model Organism: Multi-species

cotton fiber development polysaccharide composition glycome profiling transcriptomics glycosyltransferases

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