Genetius

AI-summarized plant biology research papers from bioRxiv

View Trends

Latest 16 Papers

Evolutionary origin and functional diversification of plant GBF1-type ARF guanine-nucleotide exchange factors

Authors: Singh, M. K., Lauster, T., Huhn, K., Richter, S., Kientz, M., Neher, R. A., Juergens, G.

Date: 2025-06-06 · Version: 1
DOI: 10.1101/2025.06.03.657657

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study reconstructed the evolutionary history of plant-specific GBF1-type ARF-GEFs by building phylogenetic trees and ortho‑synteny groups, identifying orthologs of AtGNOM and AtGNL1 across species. Functional analyses using transgenic Arabidopsis lines and yeast two‑hybrid assays revealed how duplication and loss events diversified GNOM paralogs, separating polar recycling from secretory trafficking functions.

GBF1-type ARF‑GEF phylogenetic analysis ortho‑synteny polar recycling yeast two‑hybrid

Diversification of the "EDVID" packing motif underpins structural and functional variation in plant NLR coiled-coil domains

Authors: Sulkowski, O., Ovodova, A., Leisse, A., Gögelein, K., Förderer, A.

Date: 2025-06-03 · Version: 1
DOI: 10.1101/2025.06.01.657260

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study investigates the conserved EDVID motif in the coiled‑coil domain of plant CC‑NLR immune receptors, revealing its role as a predictor of canonical CC‑NLR function and oligomeric assembly. It identifies a preceding acidic “preEDVID” motif in certain Arabidopsis‑related CC‑NLRs and shows that loss of the EDVID motif defines a distinct NLR subgroup, while acidic residues in the helper NLR NRG1.1 are crucial for cell‑death activity.

CC-NLR EDVID motif plant immunity motif evolution structural diversity

G3BP1 Phosphorylation Regulates Plant Immunity in Arabidopsis

Authors: Hirt, H., Abdulhakim, F., Abdulfaraj, A., Rayapuram, N.

Date: 2025-05-08 · Version: 1
DOI: 10.1101/2025.05.06.652493

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study identifies the RNA‑binding protein AtG3BP1 as a phosphorylation target of MAPKs MPK3, MPK4, and MPK6 at Ser257 in Arabidopsis thaliana and shows that this modification promotes susceptibility to bacterial pathogens, suppresses ROS accumulation and salicylic acid biosynthesis, and maintains stomatal opening. Phospho‑mimic and phospho‑dead mutants reveal that phosphorylation stabilizes AtG3BP1 by preventing proteasomal degradation, highlighting a novel post‑translational control layer in plant immunity.

MAPK signaling AtG3BP1 phosphorylation plant immunity stomatal defense

Actin Depolymerization Factors (ADFs) Moonlighting: Nuclear Immune Regulation by Interacting with WRKY Transcription Factors and Shaping the Transcriptome

Authors: Li, P., Kelley, B., Li, Z., Procter, B., Corrion, A., Xie, X., Sheick, R., Lu, Y.-j., Nomoto, M., Wei, C.-i., Tada, Y., He, S.-Y., Xiao, S., Day, B.

Date: 2025-04-30 · Version: 1
DOI: 10.1101/2025.04.29.651294

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study reveals that Arabidopsis actin depolymerization factors (ADF2/3/4) have a nuclear moonlighting role, directly interacting with WRKY transcription factors to regulate immune‑related gene expression. Nuclear, rather than cytosolic, ADFs are essential for defense against both virulent and avirulent Pseudomonas syringae, highlighting a non‑canonical mechanism linking actin dynamics to transcriptional control in plant immunity.

actin depolymerization factors nuclear transcription regulation WRKY transcription factors plant immunity Arabidopsis thaliana

SnRK1.1 Coordinates Organ-Specific Growth-Defense Programs via Transcriptomic Rewiring in Arabidopsis thaliana

Authors: Kalachova, T., Muller, K., Lacek, J., Pree, S., Antonova, A., Bondarenko, O., Burketova, L., Retzer, K., Weckwerth, W.

Date: 2025-04-29 · Version: 1
DOI: 10.1101/2025.04.25.650715

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study shows that the SnRK1 catalytic subunit KIN10 directs tissue-specific growth‑defense programs in Arabidopsis thaliana by reshaping transcriptomes. kin10 knockout mutants exhibit altered root transcription, reduced root growth, and weakened defense against Pseudomonas syringae, whereas KIN10 overexpression activates shoot defense pathways, increasing ROS and salicylic acid signaling at the cost of growth.

SnRK1 KIN10 transcriptome reprogramming plant immunity tissue-specific signaling

MYB59 is linked to natural variation of water use associated with warmer temperatures in Arabidopsis thaliana

Authors: Ferguson, J. N., Brendel, O., Bechtold, U.

Date: 2025-02-28 · Version: 1
DOI: 10.1101/2025.02.27.640580

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study surveyed vegetative water use and life‑history traits across Arabidopsis thaliana ecotypes in both controlled and outdoor environments to assess how climatic history shapes water‑use strategies. Trait‑climate correlations and genome‑wide association analyses uncovered that ecotypes from warmer regions exhibit higher water use, and identified MYB59 as a key gene whose temperature‑linked alleles affect water consumption, a finding validated using myb59 mutants. These results indicate that temperature‑driven adaptive differentiation partly explains intraspecific water‑use variation.

water-use variation Arabidopsis thaliana climate adaptation GWAS MYB59
Previous Page 2 of 2