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AI-summarized plant biology research papers from bioRxiv

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A drought stress-induced MYB transcription factor regulates pavement cell shape in leaves of European aspen (Populus tremula)

Authors: Liu, S., Doyle, S. M., Robinson, K. M., Rahneshan, Z., Street, N. R., Robert, S.

Date: 2026-01-16 · Version: 1
DOI: 10.64898/2026.01.16.699252

Category: Plant Biology

Model Organism: Populus tremula

AI Summary

The study examined leaf pavement cell shape complexity across a natural European aspen (Populus tremula) population, using GWAS to pinpoint the transcription factor MYB305a as a regulator of cell geometry. Functional validation showed that MYB305a expression is induced by drought and contributes to shape simplification, with cell complexity negatively correlated with water-use efficiency and climatic variables of the genotypes' origin.

leaf pavement cells Populus tremula MYB305a GWAS drought stress

Wheat diversity reveals new genomic loci and candidate genes for vegetation indices using genome-wide association analysis

Authors: Rustamova, S., Jahangirov, A., Leon, J., Naz, A. A., Huseynova, I.

Date: 2026-01-14 · Version: 1
DOI: 10.64898/2026.01.14.699455

Category: Plant Biology

Model Organism: Triticum aestivum

AI Summary

A genome‑wide association study of 187 bread wheat genotypes identified 812 significant loci linked to 25 spectral vegetation indices under rainfed drought conditions, revealing a major QTL hotspot on chromosome 2A that accounts for up to 20% of variance in greenness and pigment traits. Candidate gene analysis at this hotspot uncovered stress‑responsive genes, demonstrating that vegetation indices are heritable digital phenotypes useful for selection and genetic analysis of drought resilience.

Triticum aestivum drought stress spectral vegetation indices GWAS QTL hotspot

Overexpression of PtaHDG11 enhances drought tolerance and suppresses trichome formation in Populus tremula x Populus alba

Authors: Fendel, A., Fladung, M., Bruegmann, T.

Date: 2026-01-13 · Version: 1
DOI: 10.64898/2026.01.12.699028

Category: Plant Biology

Model Organism: Populus tremula × Populus alba

AI Summary

The study identified the poplar homolog of Arabidopsis HDG11 and generated transgenic poplar hybrids overexpressing PtaHDG11. Constitutive expression conferred markedly improved drought tolerance, as evidenced by higher leaf water content, reduced oxidative damage, up‑regulation of antioxidant genes, and greater post‑stress biomass, while also causing a glabrous phenotype. These results highlight PtaHDG11 as a promising target for breeding drought‑resilient trees.

HDG11 drought tolerance Populus hybrid antioxidant genes transgenic overexpression

Physiological Characterization under the Influence of Drought Stress and Salicylic Acid in Valeriana wallichii DC

Authors: Ansari, S., Patni, B., Jangpangi, D., Joshi, H. C., Bhatt, M. K., Purohit, V.

Date: 2026-01-09 · Version: 1
DOI: 10.64898/2026.01.09.698547

Category: Plant Biology

Model Organism: Valeriana wallichii

AI Summary

The study investigated the ability of foliar-applied salicylic acid (SA) to alleviate drought stress in the high‑altitude medicinal plant Valeriana wallichii by measuring physiological and biochemical responses during vegetative and flowering stages. SA at specific concentrations improved photosynthetic rates, water‑use efficiency, chlorophyll content, membrane stability, and root biomass under both severe (25% field capacity) and moderate (50% field capacity) drought conditions. These results suggest that SA treatment enhances drought tolerance and productivity in this species.

drought stress salicylic acid Valeriana wallichii photosynthetic efficiency water use efficiency

Do stomatal movements have a limited dynamic range?

Authors: Muraya, F., Siqueira, J. A., Very, A.-A., Roelfsema, R.

Date: 2025-12-26 · Version: 1
DOI: 10.64898/2025.12.22.695892

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study examined the roles of AtKUP2, AtKUP6, AtKUP8, and GORK potassium transport proteins in guard cell function by performing gas-exchange measurements on mature Arabidopsis leaves. Loss of KUP2/6/8 reduced stomatal conductance, whereas a GORK loss‑of‑function mutant showed increased conductance, yet the magnitude of light‑ and ABA‑induced transpiration changes remained similar across genotypes, suggesting a limited dynamic range for rapid stomatal movements that relies on small ionic osmolytes.

stomatal conductance potassium transporters GORK channel AtKUP2/6/8 Arabidopsis

The CCCH Zinc Finger Gene PgCCCH50 from Pearl Millet Confers Drought and Salt Tolerance through an ABA-Dependent PgAREB1-PgCCCH50 Module

Authors: xie, z., zhu, J., Yu, G., Ma, X., Zhou, Y., Yan, H., Huang, L.

Date: 2025-12-25 · Version: 1
DOI: 10.64898/2025.12.23.696222

Category: Plant Biology

Model Organism: Pennisetum glaucum

AI Summary

The authors performed a genome-wide analysis of 53 CCCH zinc‑finger genes in pearl millet, identified seven stress‑responsive members and demonstrated that overexpressing PgC3H50 in Arabidopsis enhances drought and salt tolerance. They showed that the ABA‑responsive transcription factor PgAREB1 directly binds the PgC3H50 promoter, activating its expression, as confirmed by yeast one‑hybrid, dual‑luciferase and EMSA assays, defining a new PgAREB1‑PgC3H50 regulatory module.

CCCH zinc finger proteins drought tolerance salinity stress ABA signaling Pearl millet

GWAs reveals SUBER GENE1-mediated suberization via Type One Phosphatases

Authors: Han, J.-P., Lefebvre-Legendre, L., Yu, J., Capitao, M. B., Beaulieu, C., Gully, K., Shukla, V., Wu, Y., Boland, A., Nawrath, C., Barberon, M.

Date: 2025-12-12 · Version: 2
DOI: 10.1101/2025.05.06.652434

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

Using a forward genetic screen of 284 Arabidopsis thaliana accessions, the study identified extensive natural variation in root endodermal suberin and pinpointed the previously unknown gene SUBER GENE1 (SBG1) as a key regulator. GWAS and protein interaction analyses revealed that SBG1 controls suberin deposition by binding type‑one protein phosphatases (TOPPs), with disruption of this interaction or TOPP loss‑of‑function altering suberin levels, linking the pathway to ABA signaling.

suberin deposition Arabidopsis thaliana GWAS SBG1 TOPP phosphatases

Genetic Insights from Line x Tester Analysis of Maize Lethal Necrosis Testcrosses for Developing Multi-Stress-Resilient Hybrids in Sub-Saharan Africa

Authors: Gowda, M., Beyene, Y., L.M., S., Ogugo, V., Amadu, M. K., Chaikam, V.

Date: 2025-12-09 · Version: 1
DOI: 10.64898/2025.12.07.692857

Category: Plant Biology

Model Organism: Zea mays

AI Summary

A comprehensive multi‑environment trial of 437 maize testcross hybrids derived from 38 MLN‑tolerant lines and 29 testers identified additive genetic effects as the primary driver of grain yield, disease resistance, and drought tolerance. Strong general combining ability and specific combining ability patterns were uncovered, with top hybrids delivering up to 5.75 t ha⁻¹ under MLN pressure while maintaining high performance under optimum and drought conditions. The study provides a framework for selecting elite parents and exploiting both additive and non‑additive effects to develop resilient maize hybrids for sub‑Saharan Africa.

maize lethal necrosis (MLN) drought tolerance grain yield combining ability GGE biplot

Salicylic acid-induced alkalinization of the apoplast requires TRANSMEMBRANE KINASE 1 and results in growth attenuation

Authors: Mueller, J., Xhelilaj, K., Guichard, M., Kaiser, S., Grossmann, G., Tenhaken, R., Gronnier, J., Scheuring, D.

Date: 2025-12-02 · Version: 1
DOI: 10.64898/2025.12.02.691772

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study demonstrates that salicylic acid (SA) restricts plant root growth through a mechanism requiring the transmembrane kinase TMK1, which leads to apoplastic alkalinization and inhibition of plasma membrane H⁺-ATPase phosphorylation. This SA effect operates independently of the auxin receptor ABP1, suggesting a novel SA-mediated pathway that balances stress responses with growth.

salicylic acid TMK1 apoplastic alkalinization plasma membrane H⁺-ATPase root growth regulation

KDM7-mediated oxygen sensing reprograms chromatin to enhance hypoxia tolerance in the root

Authors: Zhang, D., Chirinos, X., Del Chiaro, A., Shukla, V., Ryder, A., Beltran, A. D. P., Iacopino, S., Bota, P., Zivkovic, D., Fioriti, F., Telara, Y., Ellison, C. J., Costa, F., Elliott, P. R., Giorgi, F., Giuntoli, B., Flashman, E. G., Abreu, I., Licausi, F.

Date: 2025-11-26 · Version: 1
DOI: 10.1101/2025.11.24.690241

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study shows that Arabidopsis root tips adapt to hypoxia by increasing H3K4me3 levels, linked to the inhibition of group 7 demethylases (KDM7s). Genetic loss of KDM7s mimics hypoxic conditions, activating genes that sustain meristem survival, suggesting KDM7s act as root‑specific oxygen sensors that prime epigenetic tolerance mechanisms.

hypoxia root meristem H3K4 trimethylation KDM7 demethylase Arabidopsis
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