Genetius

AI-summarized plant biology research papers from bioRxiv

View Trends

Latest 3 Papers

Transcriptional responses of Solanum lycopersicum to three distinct parasites reveal host hubs and networks underlying parasitic successes

Authors: Truch, J., Jaouannet, M., Da Rocha, M., Kulhanek-Fontanille, E., Van Ghelder, C., Rancurel, C., Migliore, O., Pere, A., Jaubert, S., Coustau, C., Galiana, E., Favery, B.

Date: 2026-01-23 · Version: 1
DOI: 10.64898/2026.01.22.701158

Category: Plant Biology

Model Organism: Solanum lycopersicum

AI Summary

The study used transcriptomic profiling to compare tomato (Solanum lycopersicum) responses to three evolutionarily distant pathogens—nematodes, aphids, and oomycetes—during compatible interactions, identifying differentially expressed genes and key host hubs. Integrating public datasets and performing co‑expression and GO enrichment analyses, the authors mapped shared dysregulation clusters and employed Arabidopsis interactome data to place tomato candidates within broader networks, highlighting potential targets for multi‑pathogen resistance.

tomato pathogen compatibility transcriptomics co‑expression network Arabidopsis interactome

Ethylene and ROS Signaling Are Key Regulators of Lateral Root Development under Salt Stress in Tomato

Authors: Rahmati Ishka, M., Zhao, J., Sussman, H., Mohanty, D., Craft, E., Yu, L., Pineros, M., Tester, M., Kawa, D., Mittler, R., Nelson, A., Fei, Z., Julkowska, M. M.

Date: 2025-04-15 · Version: 2
DOI: 10.1101/2024.06.20.599848

Category: Plant Biology

Model Organism: Solanum lycopersicum

AI Summary

The study examined salt-induced alterations in root system architecture across a diverse panel of wild and cultivated tomato accessions, identifying tolerant varieties with distinct lateral root strategies. By combining Bulk Segregant Analysis of an F2 population with GWAS, the authors pinpointed 22 candidate genes, further narrowing to two key regulators through RNA‑Seq and functional assays involving ethylene and ROS profiling. These findings reveal genetic targets for improving salt resilience in tomato root development.

root system architecture salt stress GWAS bulk segregant analysis RNA-Seq

Loss of tomato geranylgeranyl diphosphate synthase 2 increases monoterpenoid levels and enhances immune responses to bacterial infection

Authors: Perez-Perez, J., Ezquerro, M., Lim, S., Ha, S.-H. S. H., Lopez-Gresa, M. P., Rodriguez-Concepcion, M., Lison, P.

Date: 2025-03-26 · Version: 1
DOI: 10.1101/2025.03.24.644926

Category: Plant Biology

Model Organism: Solanum lycopersicum

AI Summary

The study investigated three plastidial GGPP synthase isoforms in tomato, focusing on SlG2’s role in volatile isoprenoid production and disease resistance. CRISPR-edited slg2 mutants exhibited elevated geranyl diphosphate-derived monoterpenes and higher salicylic acid levels, leading to increased resistance against Pseudomonas syringae infection. The authors propose that SlG2 modulates GPP synthesis by competing for heterodimerization with SSU-I proteins.

GGPP synthase SlG2 monoterpenes salicylic acid Pseudomonas syringae infection