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Vacuolar invertase knockout enhances drought tolerance in potato plants

Authors: Roitman, M., Teper-Bamnolker, P., Doron-Faigenboim, A., Sikron, N., Fait, A., Vrobel, O., Tarkowski, P., Moshelion, M., Bocobza, S., Eshel, D.

Date: 2025-12-02 · Version: 1
DOI: 10.64898/2025.12.01.691554

Category: Plant Biology

Model Organism: Solanum tuberosum

AI Summary

CRISPR/Cas9 knockout of the vacuolar invertase gene (StVInv) in potato enhanced drought resilience, with mutants maintaining higher stomatal conductance, transpiration, and photosynthetic efficiency, leading to improved agronomic water-use efficiency and biomass under water limitation. Metabolomic profiling showed accumulation of galactinol and raffinose, while ABA levels were reduced, indicating altered osmoprotective and hormonal responses that support sustained growth during drought.

drought stress vacuo lar invertase knockout CRISPR/Cas9 raffinose family oligosaccharides water-use efficiency

Salicylic acid-induced alkalinization of the apoplast requires TRANSMEMBRANE KINASE 1 and results in growth attenuation

Authors: Mueller, J., Xhelilaj, K., Guichard, M., Kaiser, S., Grossmann, G., Tenhaken, R., Gronnier, J., Scheuring, D.

Date: 2025-12-02 · Version: 1
DOI: 10.64898/2025.12.02.691772

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study demonstrates that salicylic acid (SA) restricts plant root growth through a mechanism requiring the transmembrane kinase TMK1, which leads to apoplastic alkalinization and inhibition of plasma membrane H⁺-ATPase phosphorylation. This SA effect operates independently of the auxin receptor ABP1, suggesting a novel SA-mediated pathway that balances stress responses with growth.

salicylic acid TMK1 apoplastic alkalinization plasma membrane H⁺-ATPase root growth regulation

Transcriptome and hormone regulations shape drought stress-dependent Fusarium Head Blight susceptibility in different barley genotypes

Authors: Hoheneder, F., Steidele, C. E., Gigl, M., Dawid, C., Hueckelhoven, R.

Date: 2025-11-25 · Version: 1
DOI: 10.1101/2025.11.23.689882

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

Four barley genotypes were examined under simultaneous Fusarium culmorum infection and drought, revealing genotype-dependent Fusarium Head Blight severity and largely additive transcriptomic responses dominated by drought. Co‑expression and hormone profiling linked ABA and auxin to stress‑specific gene modules, and a multiple linear regression model accurately predicted combined‑stress gene expression from single‑stress data, suggesting modular regulation.

Fusarium Head Blight drought stress barley hormone profiling transcriptome analysis

The mRNA covalent modification dihydrouridine regulates transcript turnover and photosynthetic capacity during plant abiotic stress

Authors: Yu, L., Melandri, G., Dittrich, A. C., Calleja, S., Rozzi, B., Ganguly, D. R., Palos, K., Srinivasan, A., Brewer, E. K., Fischer, H., Obata, T., Elgawad, H. A., Beemster, G. T. S., Henderson, R., Garcia, C. D., Zhang, X., Stern, D., Eveland, A., Schroeder, S. J., Skirycz, A., Lyons, E., Arnold, E. A., Gregory, B. D., Nelson, A. D. L., Pauli, D.

Date: 2025-11-24 · Version: 3
DOI: 10.1101/2025.01.17.633510

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study integrates multi-omics data from six Sorghum bicolor accessions under field drought to link RNA covalent modifications (RCMs) with photosynthetic performance, identifying the enzyme SbDUS2 that produces dihydrouridine (DHU) on transcripts. Loss‑of‑function dus2 mutants in Arabidopsis thaliana reveal that DHU deficiency leads to hyperstability of photosynthesis‑related mRNAs, impairing germination, development, and stress‑induced CO2 assimilation. The authors propose DHU as a post‑transcriptional mark that promotes rapid mRNA turnover during abiotic stress, enhancing plant resilience.

RNA covalent modifications dihydrouridine (DHU) drought stress photosynthesis RNA stability

Proline transporters balance the salicylic acid-mediated trade-off between regeneration and immunity in plants

Authors: Yang, L., Xu, D., Belew, Z. M., Cassia Ferreira Dias, N., Wang, L., Zhang, A., Chen, Y.-F. S., Newton, C. J., Kong, F., Zheng, Y., Yao, Y., Brewer, M. T., Teixeira, P. J. P. L., Nour-Eldin, H. H., Xu, D.

Date: 2025-11-20 · Version: 1
DOI: 10.1101/2025.11.20.689487

Category: Plant Biology

Model Organism: Multi-species

AI Summary

The study identifies wound‑induced proline transporters ProT2 and ProT3 as central regulators that link salicylic acid signaling to the suppression of de novo root regeneration (DNRR) via modulation of reactive oxygen species dynamics. Genetic loss of these transporters or pharmacological inhibition of proline transport alleviates SA‑mediated regeneration inhibition across several plant species without compromising disease resistance.

salicylic acid proline transporters de novo root regeneration reactive oxygen species immunity‑regeneration trade‑off

Plasmodesmal closure elicits stress responses

Authors: Tee, E., Breakspear, A., Papp, D., Thomas, H. R., Walker, C., Bellandi, A., Faulkner, C.

Date: 2025-10-17 · Version: 3
DOI: 10.1101/2024.05.08.593115

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study created transgenic Arabidopsis lines enabling inducible plasmodesmal closure via an overactive CALLOSE SYNTHASE3 allele (icals3m) and the C‑terminal domain of PDLP1, independent of pathogen signals. Induced closure triggered stress‑responsive gene expression, elevated salicylic acid levels, and enhanced resistance to Pseudomonas syringae, while also causing starch accumulation, reduced growth, and increased susceptibility to Botrytis cinerea, indicating that plasmodesmal closure itself can activate immune signaling.

plasmodesmata callose deposition salicylic acid immune response transgenic closure

Micro-C in Solanum Uncovers Conserved Genome Folding and Epigenetically Defined Loops with Bifunctional Enhancer-Silencer Activity

Authors: Filler-Hayut, S., Hansen, A. S.

Date: 2025-10-16 · Version: 1
DOI: 10.1101/2025.10.16.682740

Category: Plant Biology

Model Organism: Solanum lycopersicum

AI Summary

The authors generated a high‑resolution 1.45‑billion‑contact Micro‑C map for cultivated tomato (Solanum lycopersicum), identifying ~4,600 long‑range chromatin loops that fall into promoter‑centered and Polycomb/heterochromatin‑associated classes. Comparative Micro‑C in wild tomatoes showed conserved loop anchors despite sequence turnover, and integration with transcriptomics revealed that promoter‑anchored loops can either activate or repress gene expression depending on the chromatin state of distal anchors.

chromatin loops Micro-C Solanum lycopersicum Polycomb repression gene regulation

Primary metabolism determines the outcome of salicylic acid-mediated immune induction

Authors: Zhang, Q., Xie, Y., Karapetyan, S., Wang, J., Mwimba, M., Yoo, H., Dong, X.

Date: 2025-10-14 · Version: 1
DOI: 10.1101/2025.10.13.682132

Category: Plant Biology

Model Organism: General

AI Summary

The study identified twenty survival of SA-induced death (ssd) mutants that are defective in starch, glucose, nitrate metabolism, and circadian regulation, leading to excessive carbohydrate accumulation and susceptibility to salicylic acid (SA)-induced death in prolonged darkness. Glucose application rescues SA‑treated plants by antagonizing oxidative stress and restoring metabolic balance, as revealed by transcriptomic analyses that link SA‑induced cell death to effector‑triggered immunity pathways.

salicylic acid circadian regulation starch and glucose metabolism oxidative stress glucose rescue

Immunovisualization of spatial changes in leaves and root tissue associated with drought stress in wheat (Triticum aestivum L.)

Authors: Leszczuk, A., Kutyrieva-Nowak, N., Skrzypek, T.

Date: 2025-10-07 · Version: 1
DOI: 10.1101/2025.10.06.680837

Category: Plant Biology

Model Organism: General

AI Summary

The study employed immunofluorescence labeling and fluorescence intensity quantification to examine tissue-specific cellular modifications in plants under drought stress, revealing targeted alterations in proteoglycans, polysaccharides, and AGPs in leaves and roots. These findings highlight the importance of in planta analyses for accurately capturing stress-induced structural changes.

drought stress immunofluorescence labeling proteoglycans arabinogalactan proteins (AGP) tissue-specific adaptation

Oxidative stress-induced proteolytic activation of polyphenol oxidase triggers an oxidized flavonoids-mediated stress signaling in Camellia sinensis

Authors: Mohapatra, S., Mishra, A., Godara, R., Bali, S., Twinkle,, Kumar, A., Kumar, R., Kumar, N., Kumar, P., Acharya, V., Dogra, V.

Date: 2025-09-25 · Version: 1
DOI: 10.1101/2025.09.23.677533

Category: Plant Biology

Model Organism: Camellia sinensis

AI Summary

The study discovers that drought stress triggers proteolytic activation of chloroplast‑localized polyphenol oxidase (PPO) in Camellia sinensis, converting catechins into theaflavins that act as signaling molecules to induce an unfolded protein response and IRE1‑bZIP60‑dependent programmed cell death. Germplasm comparison, transcriptomic profiling, virus‑induced silencing, PPO overexpression, and pharmacological feeding experiments demonstrate that this PPO‑theaflavin pathway is a conserved stress sensor across species such as tomato and wheat.

polyphenol oxidase theaflavins unfolded protein response programmed cell death drought stress
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