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AI-summarized plant biology research papers from bioRxiv

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Latest 15 Papers

Physiological Characterization under the Influence of Drought Stress and Salicylic Acid in Valeriana wallichii DC

Authors: Ansari, S., Patni, B., Jangpangi, D., Joshi, H. C., Bhatt, M. K., Purohit, V.

Date: 2026-01-09 · Version: 1
DOI: 10.64898/2026.01.09.698547

Category: Plant Biology

Model Organism: Valeriana wallichii

AI Summary

The study investigated the ability of foliar-applied salicylic acid (SA) to alleviate drought stress in the high‑altitude medicinal plant Valeriana wallichii by measuring physiological and biochemical responses during vegetative and flowering stages. SA at specific concentrations improved photosynthetic rates, water‑use efficiency, chlorophyll content, membrane stability, and root biomass under both severe (25% field capacity) and moderate (50% field capacity) drought conditions. These results suggest that SA treatment enhances drought tolerance and productivity in this species.

drought stress salicylic acid Valeriana wallichii photosynthetic efficiency water use efficiency

Salicylic acid-induced alkalinization of the apoplast requires TRANSMEMBRANE KINASE 1 and results in growth attenuation

Authors: Mueller, J., Xhelilaj, K., Guichard, M., Kaiser, S., Grossmann, G., Tenhaken, R., Gronnier, J., Scheuring, D.

Date: 2025-12-02 · Version: 1
DOI: 10.64898/2025.12.02.691772

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study demonstrates that salicylic acid (SA) restricts plant root growth through a mechanism requiring the transmembrane kinase TMK1, which leads to apoplastic alkalinization and inhibition of plasma membrane H⁺-ATPase phosphorylation. This SA effect operates independently of the auxin receptor ABP1, suggesting a novel SA-mediated pathway that balances stress responses with growth.

salicylic acid TMK1 apoplastic alkalinization plasma membrane H⁺-ATPase root growth regulation

Proline transporters balance the salicylic acid-mediated trade-off between regeneration and immunity in plants

Authors: Yang, L., Xu, D., Belew, Z. M., Cassia Ferreira Dias, N., Wang, L., Zhang, A., Chen, Y.-F. S., Newton, C. J., Kong, F., Zheng, Y., Yao, Y., Brewer, M. T., Teixeira, P. J. P. L., Nour-Eldin, H. H., Xu, D.

Date: 2025-11-20 · Version: 1
DOI: 10.1101/2025.11.20.689487

Category: Plant Biology

Model Organism: Multi-species

AI Summary

The study identifies wound‑induced proline transporters ProT2 and ProT3 as central regulators that link salicylic acid signaling to the suppression of de novo root regeneration (DNRR) via modulation of reactive oxygen species dynamics. Genetic loss of these transporters or pharmacological inhibition of proline transport alleviates SA‑mediated regeneration inhibition across several plant species without compromising disease resistance.

salicylic acid proline transporters de novo root regeneration reactive oxygen species immunity‑regeneration trade‑off

Plasmodesmal closure elicits stress responses

Authors: Tee, E., Breakspear, A., Papp, D., Thomas, H. R., Walker, C., Bellandi, A., Faulkner, C.

Date: 2025-10-17 · Version: 3
DOI: 10.1101/2024.05.08.593115

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study created transgenic Arabidopsis lines enabling inducible plasmodesmal closure via an overactive CALLOSE SYNTHASE3 allele (icals3m) and the C‑terminal domain of PDLP1, independent of pathogen signals. Induced closure triggered stress‑responsive gene expression, elevated salicylic acid levels, and enhanced resistance to Pseudomonas syringae, while also causing starch accumulation, reduced growth, and increased susceptibility to Botrytis cinerea, indicating that plasmodesmal closure itself can activate immune signaling.

plasmodesmata callose deposition salicylic acid immune response transgenic closure

Primary metabolism determines the outcome of salicylic acid-mediated immune induction

Authors: Zhang, Q., Xie, Y., Karapetyan, S., Wang, J., Mwimba, M., Yoo, H., Dong, X.

Date: 2025-10-14 · Version: 1
DOI: 10.1101/2025.10.13.682132

Category: Plant Biology

Model Organism: General

AI Summary

The study identified twenty survival of SA-induced death (ssd) mutants that are defective in starch, glucose, nitrate metabolism, and circadian regulation, leading to excessive carbohydrate accumulation and susceptibility to salicylic acid (SA)-induced death in prolonged darkness. Glucose application rescues SA‑treated plants by antagonizing oxidative stress and restoring metabolic balance, as revealed by transcriptomic analyses that link SA‑induced cell death to effector‑triggered immunity pathways.

salicylic acid circadian regulation starch and glucose metabolism oxidative stress glucose rescue

Impact of elevated temperature on immunity-related hormone signaling in tomato plants

Authors: Liu, K., Shivnauth, V., Castroverde, C. D. M.

Date: 2025-07-23 · Version: 1
DOI: 10.1101/2025.07.20.665745

Category: Plant Biology

Model Organism: Solanum lycopersicum

AI Summary

The study examined how tomato plants respond hormonally to infection by Pseudomonas syringae pv. tomato DC3000 at two temperatures. Results revealed temperature‑dependent expression of salicylic acid, jasmonic acid and abscisic acid marker genes, while ethylene signaling remained unchanged, underscoring the influence of environmental conditions on plant defense.

Solanum lycopersicum Pseudomonas syringae pv. tomato temperature-dependent defence salicylic acid jasmonic acid

Cis-regulatory variation in ISOCHORISMATE SYNTHASE 1 modulates systemic salicylic acid biosynthesis and systemic acquired resistance in plants

Authors: Hyun, J., Ahuja, R., Rose, H. D., Freitas, M. L. D., Welker, H., Curtis, A. M., Hewa Maithreege, A. N., Yoo, C. Y., Yoo, H.

Date: 2025-07-18 · Version: 1
DOI: 10.1101/2025.07.17.664945

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study reveals that natural variation in cis‑regulatory elements of the ICS1 promoter disrupts binding by the transcription factor CHE in several Brassicaceae species, preventing systemic induction of salicylic acid (SA) during systemic acquired resistance (SAR). Although SAR still occurs, it is weaker without the CHE‑ICS1 module, and restoring this module restores systemic SA accumulation, indicating potential for engineering enhanced immunity. The work highlights evolutionary plasticity of SAR regulation and suggests cis‑element engineering as a strategy for crop improvement.

systemic acquired resistance salicylic acid CHE-ICS1 regulatory module cis-regulatory variation Brassicaceae

Salicylic Acid Engages Central Metabolic Regulators SnRK1 and TOR to Govern Immunity by Differential Phosphorylation of NPR1

Authors: Chen, Y., Withers, J., Chen, T., Karapetyan, S., Draken, J., Xiang, Y., Droege-Laser, W., Dong, X.

Date: 2025-06-18 · Version: 1
DOI: 10.1101/2025.06.17.660129

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study demonstrates that the plant immune regulator NPR1 is modulated by opposing phosphorylation events from the nutrient-sensing kinases TOR and SnRK1, linking salicylic acid signaling to metabolic control. Under normal conditions TOR phosphorylates NPR1 at Ser‑55/59 to suppress it, whereas defense-induced SA activates SnRK1, which inhibits TOR and phosphorylates NPR1 at Ser‑557, activating immune responses.

NPR1 TOR kinase SnRK1 salicylic acid posttranslational modification

Salicylic acid accumulation correlates with low anthocyanin production in Arabidopsis

Authors: Drs, M., Iakovenko, O., Orozco, J. S. H., Trhlinova, P. B., Markovice, V., Zarsky, V., Pecenkova, T., Janda, M.

Date: 2025-06-08 · Version: 1
DOI: 10.1101/2025.06.08.658514

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study demonstrates that high endogenous salicylic acid (SA) levels suppress anthocyanin accumulation in Arabidopsis thaliana under anthocyanin‑inducible conditions, an effect confirmed by exogenous SA treatment and observed as reduced anthocyanin vesicular inclusion (AVI) abundance in mutants. The inhibition appears to be mediated by SA downstream signaling independent of NPR1 rather than by changes in SA biosynthesis.

anthocyanin salicylic acid Arabidopsis thaliana pattern‑triggered immunity anthocyanin vesicular inclusions

Systematic measurements of dose-dependent responses for combinatorial treatments of SA and JA led to the development of transcriptomic biomarkers

Authors: Tomita, A., Maeda, T., Mori-Moriyama, N., Nomura, Y., Kurita, Y., Kashima, M., Betsuyaku, S., Nagano, A. J.

Date: 2025-06-01 · Version: 1
DOI: 10.1101/2025.05.29.656841

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study investigates how varying concentrations of salicylic acid (SA) and jasmonic acid (JA) together shape transcriptional responses, revealing 43 distinct expression patterns including novel combination-specific responses. By identifying concentration-dependent regulation of genes such as CYP94B3 and glucosinolate biosynthesis genes, the authors created machine‑learning‑derived transcriptomic biomarkers that accurately estimate SA/JA response states, validated in npr3/4 mutants. These biomarkers enable quantitative analysis of phytohormone signaling across diverse transcriptomic datasets.

salicylic acid jasmonic acid transcriptomic biomarkers CYP94B3 Arabidopsis thaliana
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