The study characterizes the protein and lipid composition of chloroplast plastoglobules in the B73 maize line during a water-deficit and recovery time course, identifying key polar and neutral lipids and abundant fibrillin proteins. Quantitative proteomics revealed a strong association between Fibrillin 4 and plastoquinone‑9, suggesting a role in redox and prenyl‑lipid metabolism, thereby establishing a foundation for leveraging plastoglobules to enhance crop drought resilience.

The study evaluated how modest temperature increases affect corn smut disease (Ustilago maydis) severity across multiple maize cultivars, generating extensive phenotypic and transcriptomic data. RNA‑seq and gene‑expression association analyses revealed temperature‑dependent expression changes, pinpointing GIBBERELLIC ACID STIMULATED TRANSCRIPT‑LIKE4 (GSL4) and γ‑aminobutyric acid as key infection factors, which were subsequently validated in vivo.

The study demonstrates that mutating maize A-type cyclin genes homologous to Arabidopsis TAM induces the formation of diploid gametes with high efficiency, leading to tetraploid progeny. This provides a viable apomeiosis component for synthetic apomixis in maize, complementing existing parthenogenesis approaches.

The study examined how sudden changes in non‑saturating light intensity affect photosynthetic efficiency in the C4 crop maize (Zea mays) by measuring photosynthetic rates and metabolite pools over time. Decreases in irradiance caused transient buffering via large intercellular shuttle metabolites, but the system fell into a sub‑optimal metabolic state that required minutes to recover, while increases in irradiance produced delayed steady‑state photosynthesis due to enzyme regulation and the need to replenish metabolite pools, with CO2 back‑leakage and photorespiration further reducing efficiency.

The study finely dissected shoot stem cell–enriched tissues from maize and Arabidopsis thaliana and optimized single‑cell RNA‑seq protocols to reliably capture CLAVATA3 and WUSCHEL‑expressing cells. Cross‑species comparison and functional validation, including spatial transcriptomics and mutant analyses, revealed conserved ribosome‑associated RNA‑binding proteins and sugar‑kinase families as key regulators linked to shoot development and yield traits.

The study used comparative transcriptomics across Erysimum species to identify two 2‑oxoglutarate‑dependent dioxygenases, CARD5 and CARD6, responsible for the 14β‑ and 21‑hydroxylation steps in cardenolide biosynthesis in Erysimum cheiranthoides. Knockout mutants lacking these genes accumulated pathway intermediates, and transient expression in Nicotiana benthamiana confirmed their enzymatic functions, while structural modeling pinpointed residues linked to neofunctionalization.

The study used comparative and de‑novo transcriptomic analyses in poplar to uncover plant and fungal gene regulons that govern ectomycorrhizal (ECM) compatibility, distinguishing general fungal‑sensing responses from ECM‑specific pathways. Key findings include modulation of jasmonic acid‑related defenses, coordinated regulation of secretory and cell‑wall remodeling genes, and dynamic expression of the Common Symbiosis Pathway during early and mature symbiosis stages.

The study compared early protective, repair, and stress responses to chronic gamma irradiation in the radiosensitive conifer Norway spruce (Picea abies) and the radiotolerant Arabidopsis thaliana. Norway spruce exhibited growth inhibition, mitochondrial damage, and higher DNA damage at low dose rates, while Arabidopsis maintained growth, showed minimal organelle damage, and activated DNA repair and antioxidant genes even at the lowest dose rates. Transcriptomic analysis revealed that the tolerant species mounts a robust transcriptional response at low doses, whereas the sensitive species only responds at much higher doses.

Low red to far‑red (R:FR) light ratios increase the priming of herbivore‑induced volatile emissions in maize plants that have been exposed to neighbor volatiles, regardless of the light conditions of the emitting plants. Both constitutive VOCs and HIPVs released by maize grown under low R:FR amplify HIPV emission in neighboring receivers, indicating that canopy shade can intensify volatile‑mediated plant‑plant communication.

The study used comparative transcriptomics to examine how Fusarium oxysporum isolates with different lifestyles on angiosperms regulate effector genes during infection of the non‑vascular liverwort Marchantia polymorpha. Core effector genes on fast core chromosomes are actively expressed in the bryophyte host, while lineage‑specific effectors linked to angiosperm pathogenicity are silent, and disruption of a compatibility‑associated core effector alters the expression of other core effectors, highlighting conserved fungal gene networks across plant lineages.