Keywords: transcriptome profiling, ascorbate, comparative transcriptomics, bread wheat

Latest 18 Papers

Network analysis of flowering time genes suggests regulatory changes among SOC1 orthologues in response to cold in Brassica napus

Authors: Sidhu, G. S., Burrows, S., Woolfenden, H., Wells, R., Morris, R. J.

Date: 2026-01-20 · Version: 2

DOI: 10.64898/2025.12.16.694548

flowering time gene regulatory network comparative transcriptomics Brassica napus subfunctionalisation

Root phenolics as potential drivers of preformed defenses and reduced disease susceptibility in a paradigm bread wheat mixture

Authors: Mathieu, L., Chloup, A., Marty, S., Savajols, J., Paysant-Le Roux, C., Launay-Avon, A., Martin, M.-L., Totozafy, J.-C., Perreau, F., Rochepeau, A., Rouveyrol, C., Petriacq, P., Morel, J.-B., Meteignier, L.-V., Ballini, E.

Date: 2026-01-14 · Version: 1

DOI: 10.64898/2026.01.13.699261

Model Organism: Triticum aestivum

root-mediated interactions bread wheat Septoria tritici blotch transcriptomics metabolomics

Gene networks associated with early endosperm proliferation and basal endosperm layer differentiation in maize

Authors: Zhang, S., Ran, D., Ryu, C.-H., Li, G., Dannenhoffer, J. M., Wang, X., Drews, G. N., Yadegari, R.

Date: 2026-01-02 · Version: 1

DOI: 10.64898/2025.12.31.697219

Model Organism: Zea mays

maize endosperm development transcriptome profiling co‑expression network MYB-related transcription factors TOR signaling

Antirrhinum flower shape: unravelling gene expression across developmental axes and boundaries

Authors: Cunha, A. M., Raimundo, J., Verweij, A., Bradley, D., Coen, E., Costa, M. M. R.

Date: 2025-11-11 · Version: 1

DOI: 10.1101/2025.11.10.687484

Model Organism: Antirrhinum majus

Antirrhinum majus dorsoventral axis patterning comparative transcriptomics AmCYC/AmDIV transcription factors NGATHA‑LIKE1‑miR164 regulatory module

Symbiotic diversification relies on an ancestral gene network in plants

Authors: Castanedo, L., Melkonian, K., Vernie, T., Chauderon, L., Pellen, T., Bianconi, M., Lefort, C., Libourel, C., Le Ru, A., Aziz, S., Latorre, C., Thiercelin, O., Rodde, N., Cauet, S., Callot, C., Forrest, L., Nishiyama, T., Wickell, D., Li, F.-W., Keller, J., Delaux, P.-M.

Date: 2025-11-03 · Version: 2

DOI: 10.1101/2025.04.01.646537

Model Organism: Marchantia paleacea

ericoid mycorrhizae intracellular symbiosis ancestral gene module liverwort comparative transcriptomics

Unraveling synergistic and antagonistic effects of simultaneous versus single hypoxia-salt conditions in an evolutionary adapted plant species

Authors: Jordine, A., Alt, J., van Dongen, J. T., Fuertauer, L.

Date: 2025-10-10 · Version: 1

DOI: 10.1101/2025.10.09.681434

Model Organism: Salicornia europaea

combined hypoxia-salt stress Salicornia europaea transcriptome profiling synergistic vs antagonistic gene regulation carbohydrate and amino acid metabolism

The complex molecular basis of enhanced stress resilience in extreme drought-tolerant Arabis grassland species

Authors: Khan, A. S., Zumkeller, S. M., Schmitz, G., Calic, I., Ali, T., Rahnamae, N., Hoerdemann, L., Abdelwahed, L., Szymanski, J. J., de Meaux, J.

Date: 2025-10-02 · Version: 1

DOI: 10.1101/2025.10.02.680103

Model Organism: Arabis nemorensis

drought resilience polygenic regulation transcriptome profiling small RNA (miR408)cis‑regulatory motifs

AMF primes immune genes against Puccinia hordei (Brown rust) in Hordeum vulgare but does not reduce pathogen burden

Authors: Moulton-Brown, C. E., Brzezinska, K., Orosa-Puente, B. E., Helgason, T.

Date: 2025-09-17 · Version: 1

DOI: 10.1101/2025.09.16.676302

Model Organism: Hordeum vulgare

Barley (Hordeum vulgare)Rhizophagus irregularis Puccinia hordei mycorrhiza‑induced resistance transcriptome profiling

Controlling GRF4-GIF1 Expression for Efficient, Genotype-Independent Transformation Across Wheat Cultivars

Authors: Hayta, S., Smedley, M. A., Bayraktar, M., Forner, M., Backhaus, A., Lister, C., Clarke, M., Uauy, C., Griffiths, S.

Date: 2025-09-02 · Version: 1

DOI: 10.1101/2025.08.29.673042

Model Organism: Triticum aestivum

GRF4‑GIF1 fusion Agrobacterium-mediated transformation genotype‑independent regeneration bread wheat transformation efficiency

Molecular and Phenotypic Characterization of Telomere Repeat Binding (TRBs) Proteins in Moss: Evolutionary and Functional Perspectives

Authors: Kusova, A., Hola, M., Goffova Petrova, I., Rudolf, J., Zachova, D., Skalak, J., Hejatko, J., Klodova, B., Prerovska, T., Lycka, M., Sykorova, E., Bertrand, Y. J. K., Fajkus, J., Honys, D., Prochazkova Schrumpfova, P.

Date: 2025-06-17 · Version: 1

DOI: 10.1101/2025.06.11.659030

Model Organism: Physcomitrium patens

Telomere repeat binding proteins Physcomitrium patens knockout mutants telomere maintenance transcriptome profiling

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