Keywords: transcriptomic analysis, decoding modules, SNP array, QTL mapping, Zea mays

Latest 42 Papers

KATANIN promotes cell elongation and division to generate proper cell numbers in maize organs

Authors: Martinez, S. E., Lau, K. H., Allsman, L. A., Irahola, C., Habib, C., Diaz, I. Y., Ceballos, I., Panteris, E., Bommert, P., Wright, A. J., Weil, C., Rasmussen, C.

Date: 2025-10-06 · Version: 1

DOI: 10.1101/2025.10.05.680529

Model Organism: Zea mays

KATANIN microtubule severing Zea mays preprophase band cell elongation

Novel substrate affinity of FaCCR1 and FaCCR1/FaOCT4 expression control the content of medium-chain esters in strawberry fruit

Authors: Roldan-Guerra, F. J., Amorim-Silva, V., Jimenez, J., Mari-Albert, A., Torreblanca, R., Ruiz del Rio, J., Botella, M. A., Granell, A., Sanchez-Sevilla, J. F., Castillejo, C., Amaya, I.

Date: 2025-10-01 · Version: 1

DOI: 10.1101/2025.09.30.679181

Model Organism: Fragaria × ananassa

volatile organic compounds medium-chain esters QTL mapping FaCCR1 FaOCT4

Aphid-derived cross-kingdom RNA dynamics underpin maize resistance

Authors: Jiang, S., Zhang, Z., Liu, C., Zhu, Y., Kou, Y., Yang, P., Hu, Z., Wu, J., Wang, Y., Wan, F., Wu, G., Chen, Y.

Date: 2025-09-28 · Version: 1

DOI: 10.1101/2025.09.25.678037

Model Organism: Zea mays

aphid long non‑coding RNA cross‑kingdom effectors Zea mays RNA interference

A century of breeding has preserved genetic variation, accumulated favorable alleles, and shaped the Rht gene portfolio in North American spring wheat

Authors: Gill, H. S., Blecha, S., Conley, E., Brault, C., Fiedler, J., Cook, J., Glover, K., Green, A., Read, A. C., Anderson, J. A.

Date: 2025-09-23 · Version: 1

DOI: 10.1101/2025.09.22.677111

Model Organism: Triticum aestivum

Hard red spring wheat genetic diversity Rht dwarfing genes SNP array KASP genotyping

Spatial inheritance patterns across maize ears are associated with alleles that reduce pollen fitness

Authors: Ruggiero, D., Bang, M., Leary, M., Flieg, H., Garcia-Lamas, L., Vejlupkova, Z., Megraw, M., Jiang, D., Leiboff, S., Fowler, J. E.

Date: 2025-09-20 · Version: 1

DOI: 10.1101/2025.09.17.676879

Model Organism: Zea mays

pollen fitness spatial inheritance Ds‑GFP mutants computer vision phenotyping Zea mays

QTL mapping of oat crown rust resistance in Australian fields and identification of a seedling resistance locus in oat line GS7

Authors: Nguyen, D., Lewis, D., Henningsen, E., Su, Z., Mago, R., Sperschneider, J., Dodds, P., Rattey, A., Yimer, B., Klos, K., Figueroa, M.

Date: 2025-08-27 · Version: 1

DOI: 10.1101/2025.08.24.671654

Model Organism: Avena sativa

crown rust Puccinia coronata QTL mapping KASP markers Pc61

Partial retention of ancient function increases genetic pleiotropy in grass evolution

Authors: de Neve, A. E., Kelly, O. A., Kelly, T., Leiboff, S., Bartlett, M. E.

Date: 2025-08-23 · Version: 1

DOI: 10.1101/2025.08.22.670905

Model Organism: Zea mays

genetic pleiotropy axillary meristem suppression floral organ suppression high-throughput quantitative phenotyping Zea mays

Non-catalytic and catalytic TREHALOSE-6-PHOSPHATE SYNTHASES interact with RAMOSA3 to control maize development.

Authors: Tran, T., Claeys, H., Abraham Juarez, M. J., Vi, L. S., Xu, X., Michalski, K., Chou, T. H., Iohannes, S. D., Boumpas, P., Williams, Z., Sheppard, S., Griffiths, C., Paul, M., Furukawa, H., Jackson, D.

Date: 2025-08-12 · Version: 1

DOI: 10.1101/2025.08.09.669499

Model Organism: Zea mays

Trehalose-6-phosphate non‑catalytic TPS Zea mays protein complex developmental regulation

ZmCRY1s interact with GL2 in a blue light dependent manner to regulate epidermal wax composition in Zea mays

Authors: Zhao, Z., Feng, F., Liu, Y., Liu, Y., Wang, F., Ni, Y., Liang, H., Hu, W., Wang, S., Hao, Y., Li, X., Li, J., Wang, J., Zhang, P., Liu, H.

Date: 2025-08-06 · Version: 1

DOI: 10.1101/2025.08.06.668858

Model Organism: Zea mays

cryptochrome Zea mays blue light signaling UV-B tolerance epidermal wax biosynthesis

Gain and loss of gene function shaped the nickel hyperaccumulation trait in Noccaea caerulescens

Authors: Belloeil, C., Garcia de la Torre, V. S., Contreras Aguilera, R., Kupper, H., Lopez-Roques, C., Iampetro, C., Vandecasteele, C., Klopp, C., Launay-Avon, A., Leemhuis, W., Yamjabok, J., van den Heuvel, J., Aarts, M. G. M., Quintela Sabaris, C., Thomine, S., MERLOT, S.

Date: 2025-07-25 · Version: 1

DOI: 10.1101/2025.07.22.664359

Model Organism: Noccaea caerulescens

nickel hyperaccumulation Noccaea caerulescens genome assembly transcriptomic analysis metal transporters

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