Keywords: transcriptomic reprogramming, actin depolymerization factors, root development, alternative splicing

Latest 20 Papers

Impact of alternative splicing on Arabidopsis proteome

Authors: Reyes, A. V., Zhang, C., Karunadasa, S. S., Shrestha, R., Grismer, T. S., Byun, D., Xu, S.

Date: 2025-10-20 · Version: 3

DOI: 10.1101/2024.02.29.582853

Model Organism: Arabidopsis thaliana

alternative splicing isoform-specific peptides intron retention proteogenomics Arabidopsis thaliana

Ethylene Receptor Gain- and Loss-of-function Mutants Reveal an ETR1-dependent Transcriptional Network in Roots

Authors: White, M. G., Harkey, A., Muhlemann, J. K., Olex, A. L., Pfeffer, N. J., Houben, M., Binder, B., Muday, G. K.

Date: 2025-06-22 · Version: 3

DOI: 10.1101/2024.06.26.600793

Model Organism: Arabidopsis thaliana

ethylene signaling ETR1 root development gene regulatory network Arabidopsis

Actin Depolymerization Factors (ADFs) Moonlighting: Nuclear Immune Regulation by Interacting with WRKY Transcription Factors and Shaping the Transcriptome

Authors: Li, P., Kelley, B., Li, Z., Procter, B., Corrion, A., Xie, X., Sheick, R., Lu, Y.-j., Nomoto, M., Wei, C.-i., Tada, Y., He, S.-Y., Xiao, S., Day, B.

Date: 2025-04-30 · Version: 1

DOI: 10.1101/2025.04.29.651294

Model Organism: Arabidopsis thaliana

actin depolymerization factors nuclear transcription regulation WRKY transcription factors plant immunity Arabidopsis thaliana

Analysing the Role of KIN10 in Directional Root Growth Regulation in Arabidopsis thaliana

Authors: Retzer, K., Garcia-Gonzalez, J., Muller, K., Lacek, J., Pree, S., Friedl, N., Weckwerth, W.

Date: 2025-04-29 · Version: 1

DOI: 10.1101/2025.04.25.650732

Model Organism: Arabidopsis thaliana

SnRK1 KIN10 carbon availability root growth regulation hormone signaling transcriptomic reprogramming

A network of RS splicing regulatory proteins controls light-dependent splicing and seedling development

Authors: Saile, J., Walter, H., Denecke, M., Lederer, P., Schuetz, L., Hiltbrunner, A., Lepp, K., Lobato-Gil, S., Beli, P., Wachter, A.

Date: 2025-04-08 · Version: 1

DOI: 10.1101/2025.04.07.646831

Model Organism: Arabidopsis thaliana

photomorphogenesis alternative splicing phospho-proteomics RS (SR) proteins Arabidopsis thaliana

Chemical Inhibition of Splicing-Related Protein Kinases Reveals Phosphorylation-Driven Regulation of RNA Alternative Splicing in Arabidopsis Seedlings

Authors: Rodriguez Gallo, M. C., Murray, C., Kennedy, C., Talasila, M., Bhatt, D., Steyer, J., Glover, M., Uhrig, R. G.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.24.644839

Model Organism: Arabidopsis thaliana

SR protein kinases alternative splicing root development chemical inhibition phosphoproteomics

Next-Generation Mapping of the ACINUS-Mediated Alternative Splicing Machinery and Its Regulation by O-glycosylation in Arabidopsis

Authors: Shrestha, R., Reyes, A. V., Carey, S., Karunadasa, S. S., Zhai, W., Byun, D., Lin, W.-D., Li, J., Alerte, K., Cui, H., Wang, Z.-Y., Xu, S.-L.

Date: 2025-03-26 · Version: 2

DOI: 10.1101/2025.01.04.631329

Model Organism: Arabidopsis thaliana

alternative splicing TurboID proximity labeling O-glycosylation Arabidopsis thaliana splicing factor ACINUS