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Robust division orientation of cambium stem cells requires cortical division zone components but not the preprophase band

Authors: Liu, X., Livanos, P., Schutz, L. S., Muller, S., Greb, T.

Date: 2025-12-20 · Version: 1
DOI: 10.64898/2025.12.18.695170

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study investigates how division plane orientation is established in cambium stem cells (CSCs) of Arabidopsis thaliana, revealing that orientation is independent of spindle positioning and the preprophase band (PPB) but relies on the cortical division zone (CDZ) and POK kinesins. Using microtubule imaging and PPB-deficient mutants, the authors demonstrate that CSCs consistently divide along their longest axis through CDZ-mediated mechanisms.

cell division plane orientation cambium stem cells Arabidopsis thaliana cortical division zone PHRAGMOPLAST ORIENTING KINESIN (POK)

Alternative splicing of PIF4 regulates plant development under heat stress

Authors: Gonzalez, M. N., Alary, B., Szakonyi, D., Laloum, T., Duque, P., Martin, G.

Date: 2025-12-18 · Version: 1
DOI: 10.64898/2025.12.17.694898

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study identified a heat‑responsive exon‑skipping event in the basic Helix‑Loop‑Helix domain of the transcription factor PIF4, which reduces PIF4 activity and promotes photomorphogenic traits in etiolated seedlings. This reveals a novel post‑transcriptional mechanism by which plants modulate PIF4 function during heat stress.

PIF4 alternative splicing heat stress photomorphogenesis post‑transcriptional regulation

Root Hydraulic Conductivity and Transpiration in Arabidopsis: Coordination Revealed by a High-Stomatal-Density Mutant

Authors: Caceres, P. D., Manacorda, C. A., Sutka, M. R., asurmendi, s., Amodeo, G., Baroli, I.

Date: 2025-12-17 · Version: 1
DOI: 10.64898/2025.12.17.694893

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study examined how increased stomatal density and transpiration in the Arabidopsis thaliana epf1 epf2 double mutant affect root hydraulic properties, finding that despite higher water loss the mutant maintains leaf water status and displays reduced root hydraulic conductivity (Lpr) without changes in aquaporin expression. Under PEG‑induced osmotic stress, the wild type showed lower Lpr than the mutant, suggesting that elevated xylem tension acts as a long‑distance signal coordinating reductions in both stomatal aperture and root water transport.

stomatal density root hydraulic conductivity aquaporin expression osmotic stress Arabidopsis thaliana

Transcriptome and epigenome dynamics underpin cold stress priming in Arabidopsis

Authors: Sadykova, M., Saze, H.

Date: 2025-12-17 · Version: 1
DOI: 10.64898/2025.12.16.694799

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study examined how DNA methylation influences cold stress priming in Arabidopsis thaliana, revealing that primed plants exhibit distinct gene expression and methylation patterns compared to non-primed plants. DNA methylation mutants, especially met1 lacking CG methylation, showed altered cold memory and misregulation of the CBF gene cluster, indicating that methylation ensures transcriptional precision during stress recall.

stress priming DNA methylation cold stress Arabidopsis thaliana transcriptome dynamics

APETALA2 controls seed growth by regulating outer integument mechanical identity during seed coat differentiation

Authors: Bied, C., Yao, R., Creff, A., Lelas, L., David, D., Bauer, A., Boeuf, S., Cerutti, G., Braat, J., Launay-Avon, A., Paysan-Le-Roux, C., Clark, F., Roeder, A. H. K., Voxeur, A., Ingram, G., Golz, J. F., Landrein, B.

Date: 2025-12-17 · Version: 1
DOI: 10.64898/2025.12.16.694797

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study demonstrates that the transcription factor APETALA2 (AP2) orchestrates seed coat development in Arabidopsis thaliana by directing layer‑specific cell wall remodeling, which creates contrasting mechanical properties between the integument layers and thereby modulates seed growth. Despite these mechanical differences, mechanosensitive signaling remains unchanged, indicating a decoupling of wall composition from mechanotransduction during organ morphogenesis.

APETALA2 seed coat mechanics cell wall remodeling pectin xyloglucan

In vivo binding by Arabidopsis SPLICING FACTOR 1 shifts 3' splice site choice, regulating circadian rhythms and immunity in plants

Authors: Agrofoglio, Y. C., Iglesias, M. J., de Leone, M. J., Hernando, C. E., Lewinski, M., Torres, S. B., Contino, G., Yanovsky, M. J., Staiger, D., Mateos, J. L.

Date: 2025-12-17 · Version: 1
DOI: 10.64898/2025.12.17.693997

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study characterizes the plant spliceosomal protein AtSF1 in Arabidopsis thaliana, using iCLIP and RNA‑seq to map its in vivo branch point binding sites and demonstrate that loss of AtSF1 causes widespread 3' splice‑site mis‑selection. Structural comparison reveals a plant‑specific domain architecture, and the identified AtSF1 targets are enriched for circadian and defense genes, linking splicing regulation to timing and immunity.

alternative splicing branch point recognition AtSF1 circadian clock regulation plant immunity

WALLFLOWER, a polarized receptor-like kinase, alters cell wall properties impacting cell division and elongation in Arabidopsis

Authors: Perez-Henriquez, P., Toth, J. N., Furlan, C. R., De La Torre, R. E., Wright, D., Marks, H., Balandin, A. A., Van Norman, J. M.

Date: 2025-12-16 · Version: 2
DOI: 10.1101/2025.07.15.664984

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study identifies WALLFLOWER (WFL), a transmembrane receptor-like kinase localized at the inner polar domain of root epidermal cells, as a key regulator of coordinated cell elongation and gravitropic response. Loss‑of‑function wfl mutants display altered root wave patterns and increased cell length in specific epidermal files, phenotypes that are rescued by full‑length WFL‑GFP but not by a truncation that mislocalizes to the outer membrane. Advanced imaging (lifetime imaging and atomic force microscopy) reveals that WFL modulates the mechanical properties of inner and outer cell walls, linking lateral protein polarity to longitudinal organ growth.

WALLFLOWER receptor-like kinase root cell elongation polar membrane localization mechanical cell wall properties gravitropic response

Metabolic engineering of a tyrosine-specific phenylpropanoid pathway in plants

Authors: Van Beirs, C., Bentelspacher, M., Xie, C., Van de Velde, C., Desmet, S., De Wulf, R., Boerjan, W., Barros-Rios, J., Vanholme, B.

Date: 2025-12-16 · Version: 1
DOI: 10.64898/2025.12.16.694581

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study expressed a Brachypodium phenylalanine/tyrosine ammonia‑lyase (PTAL) in Arabidopsis thaliana to create plants that initiate phenylpropanoid biosynthesis from phenylalanine, tyrosine, or both. While the engineered pathway did not affect growth in wild‑type plants, tyrosine‑specific initiation rescued the lethal phenotype of c4h mutants but caused developmental defects due to accumulation of cis‑cinnamic acid, highlighting the evolutionary importance of the canonical phenylalanine‑derived route.

phenylpropanoid biosynthesis phenylalanine/tyrosine ammonia‑lyase (PTAL) Arabidopsis thaliana c4h mutant rescue cis‑cinnamic acid

A viral infection reshapes Arabidopsis water management via root hydraulics, aquaporin downregulation and osmotic adjustment

Authors: Manacorda, C. A., Caceres, P. D., Sutka, M. R., Amodeo, G., Asurmendi, S., Baroli, I.

Date: 2025-12-16 · Version: 1
DOI: 10.64898/2025.12.15.694488

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

Using a hydroponic Arabidopsis thaliana–Turnip mosaic virus (TuMV) pathosystem, the authors combined biometric, anatomical, hydraulic, and gas‑exchange measurements to show that viral infection curtails primary root elongation, lowers root hydraulic conductance per unit mass, and down‑regulates aquaporin gene expression. Despite unchanged aquaporin‑mediated transport proportion, infected plants exhibit a decoupling of stomatal conductance from net CO₂ assimilation, yielding a non‑adaptive rise in intrinsic water‑use efficiency and a constrained physiological state.

Turnip mosaic virus root hydraulic conductance aquaporin expression stomatal conductance water-use efficiency

Natural variation in an NLR pair confers thermostable resistance to a devastating bacterial pathogen

Authors: Aoun, N., Singh, M., Chacko, J., Maruta, N., Griffiths, C., Dangla, E., Demont, H., Carrere, S., Gouzy, J., Duflos, R., Zaffuto, M., Marchetti, M., Hancock, A., Bernoux, M., Kobe, B., Deslandes, L., Roux, F., Berthome, R.

Date: 2025-12-16 · Version: 1
DOI: 10.64898/2025.12.15.694456

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study investigates how elevated temperatures associated with climate change affect NLR-mediated immunity, focusing on the Arabidopsis RPS4/RRS1 pair that confers resistance to Ralstonia pseudosolanacearum. By integrating natural genetic variation screening, genetic mapping, polymorphism analysis, structural modeling, and functional complementation, the authors identified a specific RPS4/RRS1 haplotype whose leucine-rich repeat substitutions compromise thermostable resistance. These results suggest that leveraging natural diversity can enable the engineering of climate‑resilient disease resistance.

climate change NLR immune receptors RPS4/RRS1 thermostable resistance natural genetic variation
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